MXO02606.5prime Sequence
852 bp (606 high quality bases) assembled on 2007-04-10
> MXO02606.5prime
CAGTCGACATGGCGCTGAATAGCGAGCGATCCTTGATGCTAGTCCTATTG
GCTGCCATCTCCGTTGTTGGCCAACCCTTTGATCCTGCCAACAGTTCACC
GATAAAAATAGATAATCGCATAGTGTCCGGTAGCGATGCGAAATTGGGCC
AGTTTCCCTGGCAGGTCATACTGAAGAGAGATGCCTGGGATGATCTACTT
TGCGGAGGATCGATCATATCGGACACCTGGGTGCTCACGGCGGCCCATTG
TACAAATGGCCTGAGCTCCATCTTCCTGATGTTCGGCACTGTGGATCTGT
TTAACGCGAATGCCCTGAACATGACGTCCAACAATATCATAATCCATCCG
GACTACAATGACAAATTGAATAACGATGTCTCGCTGATCCAACTGCCAGA
ACCACTGACATTCTCGGCCAACATTCAGGCCATACAACTGGTCGGCCAGT
ACGGGGACTCGATCGATTATGTGGGCAGCGTGGCCACAATCGCTGGATTC
GGTTATACGGAAGATGAGTACCTGGACTACTCGGAAACCCTTTTGTATGC
CCAAGTCGAGATCATTGACAATGCGGATTGTGTGGCCATCTATGGTAAAT
ATGTTGTAGTGGACTCGACCATGTGTGCCAAAGGATTCGATGGTAGCGAC
ATGTCCACTTGCACCGGCGACTCTGGCGGTCCTCTCATTCTGTACAACAA
AACCATCCAACAATGGCAACAAATTGGCATCAACTCATTCGTCGCTGAGG
ATCAATGCACATACCGGCTACCATCTGGATACGCACGGGTCTCGTCCTTC
CTCGGCTTCATTGCAGACAAAACGGGCATTGCTGTAGCAAGCTTTCTAGA
CC
MXO02606.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8952-PA | 831 | CG8952-RA | 1..828 | 9..836 | 4140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8952-RA | 902 | CG8952-RA | 32..862 | 6..836 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15765510..15766235 | 836..111 | 3630 | 100 | Minus |
| X | 23542271 | X | 15766309..15766414 | 111..6 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:56:55 has no hits.
MXO02606.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:12 Download gff for
MXO02606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8952-PA | 1..831 | 9..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:48 Download gff for
MXO02606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8952-RA | 29..866 | 1..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:53 Download gff for
MXO02606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8952-RA | 29..866 | 1..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:53 Download gff for
MXO02606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15765505..15766235 | 111..840 | 99 | <- | Minus |
| X | 15766310..15766417 | 1..110 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:48 Download gff for
MXO02606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15659538..15660268 | 111..840 | 99 | <- | Minus |
| arm_X | 15660343..15660450 | 1..110 | 97 | | Minus |
