MXO02608.5prime Sequence
606 bp (606 high quality bases) assembled on 2007-04-10
> MXO02608.5prime
CAGTCGACATGGAAAAACTGGAGGCCCTAAAAATATCCTCGATGCGTCCG
CGCAGCAACATCCTAGACAGACCACTATCCAAGGGCAAAACGGAGGTTTC
CCAGAGCATTGTGGCGCTGCTTTTCAGCGAAATCGTCCAGTACTCGCAGA
GCCGAGTGTTTACAGTCCCAGAATTGCAAACAAGACTCCACGATCTGGGT
CAAGATGTAGGCACCCGCATAATCGACCTGTATTTCGTGAGGGAGCGCAG
CTCCAAGCGAGAAACAAAACTAACCCAAATGCTTCTCTTTGTTAAGACCA
CGGTGTGGAAGAATCTCTTTGGCAAAGAGGCGGAGAAACTGGAACATGCC
AACGACGACGAAAGGACATATTATATAATTGAACAGGAACCGCTTGTCAA
CACATTCATAAGCGTGCCAAAGGATAAGGGCTCGCTGAATTGCGCTAATT
TCACCGCTGGCATCGTGGAAGCTGTGCTCACGAACTGCGGATTTCCGTGC
AAGGTCACCGCCCACTGGCACAAGGGCACCACGTACATGGTCAAATTTGA
GGACTTTGTCATCGCCCGCGACAAGCAGATGGAGGAGAAAGCAAGCTTTC
TAGACC
MXO02608.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10153-PA | 585 | CG10153-RA | 1..582 | 9..590 | 2835 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trs31-RA | 666 | CG10153-RA | 66..647 | 9..590 | 2865 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14757241..14757552 | 494..183 | 1515 | 99 | Minus |
| 2R | 25286936 | 2R | 14757606..14757781 | 184..9 | 880 | 100 | Minus |
| 2R | 25286936 | 2R | 14757083..14757178 | 590..495 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:33:35 has no hits.
MXO02608.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:12 Download gff for
MXO02608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10153-PA | 1..585 | 9..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:53 Download gff for
MXO02608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10153-RA | 59..650 | 1..594 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:27 Download gff for
MXO02608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trs31-RA | 59..650 | 1..594 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:27 Download gff for
MXO02608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14757079..14757178 | 495..594 | 98 | <- | Minus |
| 2R | 14757241..14757550 | 185..494 | 99 | <- | Minus |
| 2R | 14757606..14757788 | 1..184 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:53 Download gff for
MXO02608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10645111..10645293 | 1..184 | 97 | | Minus |
| arm_2R | 10644584..10644683 | 495..594 | 98 | <- | Minus |
| arm_2R | 10644746..10645055 | 185..494 | 99 | <- | Minus |
