MXO02617.5prime Sequence
345 bp (345 high quality bases) assembled on 2007-04-10
> MXO02617.5prime
CAGTCGACATGGCATTCGGTGACTATCCAGCTGAGTACAACCCCAAGGTG
CACGGGCCCTACGACCCCGCTCGCTTCTACGGCAAAGCCGATGTGCCCTT
CGGCCAGGTCAAGCTGGGCGAGATCGGCGCCTGGCTGGGACGCCGCAACA
AGACCCCCAACGCTGTGGCCGGAGCTGTGAGCCGTGCCTGGTGGCGCTGG
CAGCACAAGTACGTGTTCCCAAAGCGCGCCGGGATCGCTCCCTTCTTCCA
GCTGACCGTCGCCAGCATGACGTTCTTCTATCTGATTAACTACACCAAGT
TGAAGCACCACAGGAACTACAAGTACCACGCAAGCTTTCTAGACC
MXO02617.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:08:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4692-PB | 324 | CG4692-RB | 1..321 | 9..329 | 1605 | 100 | Plus |
CG4692-PA | 324 | CG4692-RA | 1..321 | 9..329 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4692-RA | 591 | CG4692-RA | 103..423 | 9..329 | 1605 | 100 | Plus |
CG4692-RB | 548 | CG4692-RB | 60..380 | 9..329 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24599256..24599499 | 329..86 | 1220 | 100 | Minus |
4 | 1348131 | 4 | 976898..977091 | 129..322 | 820 | 94.8 | Plus |
2R | 25286936 | 2R | 24599617..24599695 | 87..9 | 395 | 100 | Minus |
4 | 1348131 | 4 | 976824..976900 | 13..89 | 325 | 94.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:27:48 has no hits.
MXO02617.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:16 Download gff for
MXO02617.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4692-PA | 1..324 | 9..333 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:50 Download gff for
MXO02617.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4692-RB | 56..385 | 1..335 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:49 Download gff for
MXO02617.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4692-RB | 56..385 | 1..335 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:49 Download gff for
MXO02617.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24599251..24599497 | 88..335 | 99 | <- | Minus |
2R | 24599617..24599702 | 1..87 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:50 Download gff for
MXO02617.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20486774..20487020 | 88..335 | 99 | <- | Minus |
arm_2R | 20487140..20487225 | 1..87 | 96 | | Minus |