MXO02619.5prime Sequence
599 bp (598 high quality bases) assembled on 2007-04-10
> MXO02619.5prime
CAGTCGACATGGATCTGATCATTCTCGTGGGGATTGCCGTAGCTCTTTTA
GTTGTGATCGTCACACTGTACCTGCTGCAAAAGAAAAACGCCGCCCCAGA
AACCAAGGTAGCTGCAGCTCCTCAACGTGGCGTTCCACAGCGCGCCCAGG
AGGGTGTTCCGCGTCGGGCTCAAATAGCTCGAAATCAGCGCAATCGACTG
CGCCAGAATGTTCCAGCGGCTCCAGTCGCCGCGGCAGCTGGTGCTCTTCC
GGCTGCCGGCGACTCTGACCACGAGGACGAGGGTCAGGTCGATGGTGATG
AGGCACGTGTGCCCCAGGGAGCGGTGCTGGATGAGAAAATGGGTGCTAAG
AAGCGTGCCAAGATGGAGGCCAAGGAGCACAACCGGCTTCAGCGGGAGCA
GGAACTGCACGATCGCGAACAGCGCAAGGTGAAGGAGGCGAAGGAGGAGG
CGGAGCGCAAGCAGCAAGAAGACCTTGAGGCAGAGGCCGAGCGCAAGCGG
GTGGATGCCGAGCGCCTGGCCAAAGAGGAACGGGAGCGCAAGGAGCACGA
GGAGTACCTGAAGATGAAGGCTGCCTTCAGTGTGGAGGAAGAGGGCTTC
MXO02619.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:08:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5862-PA | 930 | CG5862-RA | 1..591 | 9..599 | 2905 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5862-RA | 1090 | CG5862-RA | 82..672 | 9..599 | 2925 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21215306..21215808 | 97..599 | 2485 | 99.6 | Plus |
| 3R | 32079331 | 3R | 21215160..21215250 | 9..99 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:08 has no hits.
MXO02619.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:17 Download gff for
MXO02619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5862-PA | 1..591 | 9..599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:07 Download gff for
MXO02619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5862-RA | 74..672 | 1..599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:00 Download gff for
MXO02619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5862-RA | 74..672 | 1..599 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:00 Download gff for
MXO02619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21215152..21215250 | 1..99 | 96 | -> | Plus |
| 3R | 21215309..21215808 | 100..599 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:07 Download gff for
MXO02619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17040874..17040972 | 1..99 | 96 | -> | Plus |
| arm_3R | 17041031..17041530 | 100..599 | 99 | | Plus |
