MXO02621.5prime Sequence
814 bp (616 high quality bases) assembled on 2007-04-10
> MXO02621.5prime
CAGTCGACATGGCGCTGATTCCGGCTGTTACCAGACTCACCTCCTCCGTA
ATTCGGATACTGGGTTGTAATCCCAGTGCCATGACGCTCCAGGGCACCAA
TACGTACCTCCTCGGCAGTGGCAGTAGGAGAATCTTGATCGACACTGGTG
ACGAAGACGTGCCGCAGTACATCGCTCACCTGGGAGATGTGCTACAGCAG
GAAAAGGCCTCCATCGACACCATCCTGCTGACCCACTGGCACCACAACCA
TGTCGGCGGTGTAAAGAGCATTGTGGGTACTAAATTGGCCGAAAAGGATT
GCCGCGTATTCAAGTTTGGGCGTACAGATGCTCCAAATGTGTGCCCCGAG
ATACCGACGGATATCAAACTCCATCCGCTAGCACACAACCAAGAGTTCAC
CACGGAGGGGGCGAATGTGCGGGTGGTTCACACACCCGGTCACACCACTG
ATCATGTGGTGCTGGCCATGAACGAGGGCACACTCTTCAGCGGCGATTGC
ATCCTTGGCGAGGGCACCGCCGTCTTCGAGGACCTATTTGAGTACATGAA
AAGCCTGGAGAAGATACTAGACATCAAGCCGCAGCGTATCTTTCCAGGCC
ATGGCAATGTCATTGAGGAACCAATTGGCAAGATTGAGTACTACATTAAC
CATCGCAACCAGCGAGAACAGCAGATCCTGCAGTTCTTCGTTCAGCGGCC
CAACGAACACTTGCAGGCTATGGACGTCGTGAAGGTGGTCTACAAGGAGA
CACCAGAAAACCTCTGGCCCGCCGCCGCCTATAACGTGAACCACCACCTA
AGCAAGCTGGAGAA
MXO02621.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:08:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12375-PA | 879 | CG12375-RA | 1..806 | 9..814 | 3930 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12375-RA | 1165 | CG12375-RA | 152..957 | 9..814 | 3970 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8125876..8126681 | 814..9 | 3970 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:21:15 has no hits.
MXO02621.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:17 Download gff for
MXO02621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12375-PA | 1..804 | 9..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:08 Download gff for
MXO02621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12375-RA | 145..957 | 1..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:03 Download gff for
MXO02621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12375-RA | 145..957 | 1..814 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:03 Download gff for
MXO02621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8125876..8126688 | 1..814 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:08 Download gff for
MXO02621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8125876..8126688 | 1..814 | 99 | | Minus |
