MXO02629.5prime Sequence
889 bp (782 high quality bases) assembled on 2007-04-10
> MXO02629.5prime
CAGTCGACATGTCCGCTACGCCACGCCAGAAGCAGTTCGACATGAATCGT
AGCCGGGCCAATAACTTGGACAGCAGCAGAAGCGGGTCTGCCAACAACAA
AAACACCACGGACAGCACGAAAAATGTGGTTTCCCCGCAACACAATCAAC
GCAAGCTGCAAGCCTCCATGGAGCGCCTACAGGTGCAACAGGTGAACACA
AGTCGCCGGGCAGCCGGCTCCAACTGGATGGCCGCTGCTGGCGGTGGAGC
AGCAGCAGCAGCTGGAAGTGAAAACCAGGATGCCAAGGCGACGGAGTCAG
CACCACTAAGCAAATCGGCACGCATGCGCATGAAAAAGAAGGCACACCGC
AATCGCATTTTGGCCATGGACTGCGAGATGGCGGGCGTGGGACACAACAC
ACGGGACGACATGCTGGCACGCGTGTCCATCGTGAATCGCATGGGACACG
TGCTGCTGGACAAGTATGTGAAGCCGCGAAAGGAGGTCACCGACTACCGC
ACCAGCGTGTCCGGCATTCGGCCGCAGGACATCGCTAACGGTGAGGACTT
TGCCGCCGTGCAAAACGAAGTGATGAAGCTGATACATGGCCGCATTCTGG
TGGGACACGGCCTGCGCAACGATCTTGCCGTACTGGGCATCCGCCATCCG
TTCCATGACATTCGTGATACGTCGCATTATAAGCCGCTGTGCAAACTCAT
CTCTAATACCCACACGCCCAGCTTAAAACGCCTGACAAAGGCCGTTCTGG
GTCAGGAGATCCAAACGGGCGAGCATAATTCCGTGGAGGATGCACGTGCC
GCCATGGGTATCTACAATCGCGTTGCCGTCGACTGGGAGAAGTATCTGGA
GAAGAAGCGGCATCAACAGCAGCACTATGCAAGCTTTCT
MXO02629.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:09:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6833-PA | 873 | CG6833-RA | 1..870 | 9..878 | 4325 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6833-RB | 1187 | CG6833-RB | 53..923 | 8..878 | 4340 | 99.9 | Plus |
| CG6833-RA | 1264 | CG6833-RA | 130..1000 | 8..878 | 4340 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14051335..14052205 | 8..878 | 4340 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:22 has no hits.
MXO02629.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:20 Download gff for
MXO02629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6833-PA | 1..873 | 9..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:10 Download gff for
MXO02629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6833-RA | 123..1012 | 1..889 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:06 Download gff for
MXO02629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6833-RA | 123..1012 | 1..889 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:06 Download gff for
MXO02629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14051328..14052217 | 1..889 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:10 Download gff for
MXO02629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14044428..14045317 | 1..889 | 98 | | Plus |
