MXO02630.5prime Sequence
334 bp (308 high quality bases) assembled on 2007-04-10
> MXO02630.5prime
CAATCGACATGAGGATCCTACCAATTGTGATTCTGACCTTGATGACGGTC
CATTCCGGCTGCGGAAAGAAGCAAAGCAAGAAGGAAAAGGACAAGGGTCC
CTGTGGCAAACCGTATCTCAGGGAGCTAAACGGAAAGTGCTTCTATGTGG
GCATCAAAAAGATCAACTGGTTCGGGGCCCACAACAACTGCCTGCGCAAG
GGCCTCAACCTGGCCGACGTGTCCACGATGGAGGACTTCAAGGCGGTGGT
ACACTACGTGACGTCACAGGTGGGCTTCGATGACTTCTGGTTCGGTGGCA
ACGATCTGCAGTCGGAGGGGCGCTTCGAGTACAT
MXO02630.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1656-PA | 987 | lectin-46Ca-RA | 1..326 | 9..334 | 1555 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-46Ca-RA | 1105 | CG1656-RA | 20..346 | 8..334 | 1590 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9817602..9817776 | 160..334 | 845 | 98.9 | Plus |
| 2R | 25286936 | 2R | 9817319..9817472 | 8..161 | 755 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:33:25 has no hits.
MXO02630.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:20 Download gff for
MXO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1656-PA | 1..326 | 9..334 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:50 Download gff for
MXO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Ca-RA | 16..346 | 1..334 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:26 Download gff for
MXO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Ca-RA | 16..346 | 1..334 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:26 Download gff for
MXO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9817315..9817472 | 1..161 | 96 | -> | Plus |
| 2R | 9817604..9817776 | 162..334 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:50 Download gff for
MXO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5704820..5704977 | 1..161 | 96 | -> | Plus |
| arm_2R | 5705109..5705281 | 162..334 | 98 | | Plus |
