MXO02631.5prime Sequence
782 bp (601 high quality bases) assembled on 2007-04-10
> MXO02631.5prime
CAGTCGACATGAGCGCTCCAGAAGAACATAAGGAGACGCCTTTGGAGGTG
ATCCATGAGTTCATCAATGGCGTAAATGATGGGACCATACGCCGCGACCT
GGGGGAGGACTGCATCCTCAGCTTCTACAGTCGAAATGTGCGTGGCGCCA
AGGCAATCACCGGATTTTTGAGAAACCAGTTGACAATGCGCTACAAGCAC
GAGGGATTCGAGGAAGCAGCACAAATTGAGTGGGGCGACGAACTTCTGCT
GAAGGCGCGCTTCGGCAGATCGTTTGACTCGGAACGTCGTCGCATCTACG
AGGAGAAGGAGCGCACAGGCACCACTCTGCATGTGCGTCCAGAGAGCGAT
GACGAGGAGGTAAATGAAAATTTTTCCTCACCCCTGATCACACCGCCCCG
TCCATCGAGCTACAATTTGAACTCCCTGAAGTATGTGGAGGCGTGTGGCC
TGTTGAACAAGCGTAATGAACATATCTACGGCGGCCTGGACATGGGCGAG
TCATGCGCGGTCCACCTTACTTTGGGCTATCGGAGCACCTTTCTGCCCGG
CGGTCAAGTGAGCGGCTTTGAAATCTGCCTGGCTGTCTACGATCGGGGTC
TGACCAGCCTCAAACGATCCACTCTGATTCCGCCACTGTGCAGCATTTCC
TTTGCACGACGGGCCAGCGCCCGATGTAATCCAACCACCGATGATGAGGA
GGATACCGAGGAGGATTCAACGCCGCCAACAGCGAGGCGCTGCGTGCGTC
GTACTTTATTTACAGAGGAGAACACTCAGAAA
MXO02631.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4336-PA | 1008 | rux-RA | 1..774 | 9..782 | 3770 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rux-RB | 1319 | CG4336-RB | 72..845 | 9..782 | 3810 | 99.5 | Plus |
| rux-RA | 1420 | CG4336-RA | 173..946 | 9..782 | 3810 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6036227..6036978 | 782..31 | 3700 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:48:30 has no hits.
MXO02631.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:21 Download gff for
MXO02631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4336-PA | 1..771 | 9..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:00 Download gff for
MXO02631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rux-RA | 167..943 | 1..779 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:47 Download gff for
MXO02631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rux-RA | 167..943 | 1..779 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:47 Download gff for
MXO02631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6036230..6036978 | 31..779 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:00 Download gff for
MXO02631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5930263..5931011 | 31..779 | 99 | <- | Minus |
