MXO02633.5prime Sequence
366 bp (366 high quality bases) assembled on 2007-04-10
> MXO02633.5prime
CAGTCGACATGTTATTCCTAGCGCCGCGCAAACATCTGTTTGCCACCAAC
CTGATCATCCTGCTGATGATCTACTTGATGCGCAAGTGCCTGCAGCTCTT
CTGCATCATCGAGAACCGCGCCGTTCATCCGGCCGAGGAAGAGGAGAAGG
AGGTCAAGTTGCCGGAAAGGGAGATCCTCCAGAAGCGCCGCGGCGGCTTC
ACCATCATCCCAGCTGCCATGCACCAGAGCATGCACGGCTTCGGCTACGG
CGAGGGTCACTACCAGATCTTTGTGGAGAAGAAGGAGCGTAACCTCCCAA
CCAAATCGCGCCTTAACGCGGCCACTGCTGAAGTCAAGCTGAATCCCAAT
GCAAGCTTTCTAGACC
MXO02633.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8960-PA | 345 | CG8960-RA | 1..342 | 9..350 | 1710 | 100 | Plus |
| CG8960-PB | 288 | CG8960-RB | 1..285 | 66..350 | 1425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8960-RB | 659 | CG8960-RB | 110..451 | 9..350 | 1710 | 100 | Plus |
| CG8960-RA | 1016 | CG8960-RA | 467..808 | 9..350 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2197540..2197881 | 9..350 | 1710 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:22:01 has no hits.
MXO02633.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:21 Download gff for
MXO02633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-PA | 1..345 | 9..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:26 Download gff for
MXO02633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-RA | 463..813 | 1..358 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:23 Download gff for
MXO02633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-RA | 463..813 | 1..358 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:23 Download gff for
MXO02633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2197536..2197886 | 1..358 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:26 Download gff for
MXO02633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2197536..2197886 | 1..358 | 97 | | Plus |
