MXO02636.5prime Sequence
327 bp (135 high quality bases) assembled on 2007-04-10
> MXO02636.5prime
CAATCGACATGTCGCTTACCCCCTTTCTACGCCTGCCCTTAACCGATCTG
ACCGGGTGCCTAATTAACCACCAAACCTACGACAAGTGCGGAAAATTCAA
GATGAAAATGATGGAGTGCTTCGAGGCCTATGGCCTGCAGCGTGGAAAAC
GGGAGTGCGCCGACCTGATCTCCGACTTTCAGGAGTGCGTCGGCATGCAC
AACCAACTGATGCGCTTCCATGCAATGCAAAACGAACGCTACAAGCATTG
GCTCAAGGGGGAGCGTAAGGGACAATAATTTTTTGCGGATCCCCCACGCG
TTGATGCCTACGCAAGCTTTCTAGACC
MXO02636.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11455-PA | 306 | CG11455-RA | 1..303 | 9..311 | 1315 | 97.3 | Plus |
| CG11455-PB | 306 | CG11455-RB | 1..303 | 9..311 | 1315 | 97.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11455-RK | 798 | CG11455-RK | 413..715 | 9..311 | 1395 | 97.4 | Plus |
| CG11455-RJ | 869 | CG11455-RJ | 484..786 | 9..311 | 1395 | 97.4 | Plus |
| CG11455-RG | 678 | CG11455-RG | 293..595 | 9..311 | 1395 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 155572..155785 | 9..222 | 995 | 97.7 | Plus |
| 2L | 23513712 | 2L | 155851..155947 | 215..311 | 410 | 94.8 | Plus |
Blast to na_te.dros performed 2014-11-28 22:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1148..1212 | 72..136 | 109 | 63.1 | Plus |
MXO02636.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:23 Download gff for
MXO02636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11455-PB | 1..306 | 9..312 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:55 Download gff for
MXO02636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11455-RG | 285..595 | 1..311 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:51 Download gff for
MXO02636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11455-RG | 285..595 | 1..311 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:51 Download gff for
MXO02636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 155564..155784 | 1..221 | 95 | -> | Plus |
| 2L | 155858..155947 | 222..311 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:55 Download gff for
MXO02636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 155564..155784 | 1..221 | 95 | -> | Plus |
| arm_2L | 155858..155947 | 222..311 | 96 | | Plus |
