MXO02637.5prime Sequence
783 bp (690 high quality bases) assembled on 2007-04-10
> MXO02637.5prime
CAGTCGACATGACATCGATTGCCAAGTCCATAGTACTATTGGCATCCCTG
GCCACGTTCGCTTACTCCCTGTACGTGGTTGGCAGCCTGATGATGTTCCT
TTCGACGCCTCGTTCGATTTCCAAGGCGCACACCTGGATTTTCAATTTAC
TGGACAACAAGTCGCGCCTGCAGACCGCCTATGGACCCGTGGTGTTCGAT
ACCCTCTACCTGATCGGATTCATCTTCCAGCACAGCTTCCTCAAGTCAGC
CGTGGTCAAGAAGCTGTTGGCCAAGTTGGGATTGTCGGGTGCGGAGCGCA
CTATTTATAGCCTGACGTCATCGCTTTGTTTACATTATTTGATCGTCAAC
TGGCTGCCCGCTCAGTCGATTGTTCTGTGGCAAATCGATGTGGAGCAGAG
TGCTCCGCTTTGGTGGACCTTCGTGATCACCCATGGCATCTGCTGGGTTG
TCATCTTTGGCGGCAGTTTGGTGATGGATCTGCCAGAGCTGCTGGGCGTC
AAGCAAGCCTACTACGATCTGAAGGCCTACGGACCGCCCATCAGCTACAA
ATCCGGGGAATTGCGCAATCTGTACGCCCATGTCAGACATCCCTCGTTTG
TGGGCCTGTCGGTCATCCTGTTCGCCACGAATGTGATGAGCGTGGATCGG
CTAGTCATGGCCTTGCTGCTGACCACCTACATGTACCTGGCCTGGTCCAC
AGATCAGAAGGATGTGGCCTATCAGAAGATTCAACTGCAGCGCAAGAAAC
TCGAACTGAAGGCCAAGGCAAGCTTTCTAGACC
MXO02637.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:10:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7655-PA | 762 | CG7655-RA | 1..759 | 9..767 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7655-RA | 1046 | CG7655-RA | 121..879 | 9..767 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17683175..17683606 | 336..767 | 2160 | 100 | Plus |
| 3R | 32079331 | 3R | 17682789..17683115 | 9..335 | 1635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:33:48 has no hits.
MXO02637.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:23 Download gff for
MXO02637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7655-PA | 1..762 | 9..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:58 Download gff for
MXO02637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7655-RA | 121..886 | 9..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:34 Download gff for
MXO02637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7655-RA | 121..886 | 9..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:34 Download gff for
MXO02637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17682789..17683115 | 9..335 | 100 | -> | Plus |
| 3R | 17683175..17683613 | 336..775 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:58 Download gff for
MXO02637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13508511..13508837 | 9..335 | 100 | -> | Plus |
| arm_3R | 13508897..13509335 | 336..775 | 99 | | Plus |
