MXO02639.5prime Sequence
603 bp (591 high quality bases) assembled on 2007-04-10
> MXO02639.5prime
CAGTCGACATGTTGGACTTCCTGACGGAGCTGCGAAGCAGTGGTTCTAGG
GCGGATCAGCTGCCCGGCAACATATACACCGAGTTCTTCGCGAACGTTAT
CGAGGAGCCCAGGGAACATGGATGCAAGTCAGCGGATCAGGATTTTACAC
AAGGATTCTCCATGCTACGCACTTTCGATACCGAAAATAGCAATCAATTG
GAGCCGCCGGCGGCCACGGATGCGGATGTCTGGATCTTTGGCTATGGGTC
GTTGGTATGGAAGACGGACTTCCCGTACATAGACCGACGACGCGGCTTCG
TTTGGGGATTCAAGCGTCGCTTCTACCAGCACAGCATCGATCACCGGGGT
ATTCCCGAACGTCCTGGTCGCGTGGTCACCCTGCTGCCAGGCGATCCCGC
CCAGGATCGTGTCTATGGCGTCGCCTATCGCATAGCTGCTAGTCAAAAGG
GTGCTGTGTTGGACCATCTGGATTACCGGGAGAAGAACGGGTATGAGCGC
TGCAGCTTGGAGTTCCACGAGTATCCGACTGACGGTGCAGAACCCATCCA
AGTGATCATGTACGTGGCCACGCAGGCGAACGATTCCTATGCTGGGTGAT
GTG
MXO02639.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:11:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2540-PA | 936 | CG2540-RA | 1..587 | 9..595 | 2935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2540-RA | 1234 | CG2540-RA | 82..675 | 9..603 | 2950 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12629959..12630545 | 9..595 | 2935 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:47:00 has no hits.
MXO02639.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:24 Download gff for
MXO02639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2540-PA | 1..594 | 9..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:56 Download gff for
MXO02639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2540-RA | 77..675 | 1..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:37 Download gff for
MXO02639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2540-RA | 77..675 | 1..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:37 Download gff for
MXO02639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12629954..12630552 | 1..603 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:56 Download gff for
MXO02639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12523987..12524585 | 1..603 | 99 | | Plus |
