Clone MXO02647 Report

Search the DGRC for MXO02647

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:26
Well:47
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG32278-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02647.5prime Sequence

357 bp (357 high quality bases) assembled on 2007-04-10

> MXO02647.5prime
CAGTCGACATGGGTCGCAACAAGGCAAACAACAAGAAGGTTACTCCTGGG
GCCGCCAAGCCAAAGTCGGCTCTGAACAAGTCCAAAAAGGCCAAGAACGT
ATTCAAAGTGGGCGACGGTAACAAGGGCAAGGGCAAGAAGCCCAAGGAAG
TGCAGGGCAAGCTCAAGCAGATCAAGGAATCTGTTAAAGCTAAGCAGGAG
AAATTGGACGCCAGCCTGAAGACTCTACACAAGGATCTGGTGGTGAAGAA
GCCAAAGGCACCTGTGGCACCCATCAAGAGCTACAAGAAGAAGGGGGTCG
ATGCCCAGAAAGTGTCCGACACACTAAGCAAACTCAAGTTCGCAAGCTTT
CTAGACC

MXO02647.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32278-PA 336 CG32278-RA 1..333 9..341 1665 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG32278-RA 845 CG32278-RA 80..412 9..341 1665 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3171160..3171334 167..341 875 100 Plus
3L 28110227 3L 3170945..3171106 9..170 810 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:31:11 has no hits.

MXO02647.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:27 Download gff for MXO02647.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32278-PA 1..336 9..345 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:49 Download gff for MXO02647.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32278-RA 72..421 1..352 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:28 Download gff for MXO02647.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32278-RA 72..421 1..352 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:28 Download gff for MXO02647.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3170945..3171106 9..170 100 -> Plus
3L 3171164..3171343 171..352 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:49 Download gff for MXO02647.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3170945..3171106 9..170 100 -> Plus
arm_3L 3171164..3171343 171..352 97   Plus