MXO02650.5prime Sequence
663 bp (647 high quality bases) assembled on 2007-04-10
> MXO02650.5prime
CAGTCGACATGGCCGATATCAGGAGCAGCTTGAAGGTTCTCTTCCAGGGC
GAGACCAACCTCATCACTTGCGGATCCTCGAACACTTACGAAGAGGTCAT
CTCCCAAGCCATGACCCGCTTCGCCATTCCGGAGACACAAAGGAAAGCCC
TCATCCTGACCAACGGCAAGGACTACGTGTTTGAGGCGCATTTGCTGGAG
TATTTCCTGCTTTTGTTCCCCTGCCCGGAGATCACCTTTCACCTGAGATT
TGACTGGTCAAAGATGCGCCGCAGTCTGGGCCAGACCGAGTCCCTTAAGC
GAAAGCGTCTAGTGGATTTGGAGCAAGCCGAGGGTCAGAAGGAGGAGGAC
CAAGAAAAGGAAGATCCGGTGCCGGAGTACAAGCCGGTGCCGGTCTACCG
GATGAATTGCTTCCTGGGATCGCTGCCCACTGCCGGCGCCATTCCTGTGC
ATCGTCAGAACTGTTTCCTTAGGGAACAGTCGCAGCAGCAGCTGGATGAG
ATTTCCATACCTCGGCTGCAGGAGGACGATGACCAAAAGGAGCCGCCCAA
GAAGCGCCAGCGCGTGGACGTCTGTTCGAAGCCAAGACGCACAGCGTCCA
CGTCGGTTGGTCCGTCTCCCGTTCCTGTCATGCGCTCGATTCGCATCGCA
AGCTTTCTAGACC
MXO02650.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:12:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10965-PA | 642 | Corp-RA | 1..639 | 9..647 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Corp-RB | 1216 | CG10965-RB | 148..786 | 9..647 | 3195 | 100 | Plus |
| Corp-RA | 1084 | CG10965-RA | 148..786 | 9..647 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8270328..8270868 | 647..107 | 2705 | 100 | Minus |
| X | 23542271 | X | 8271163..8271262 | 108..9 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:28:18 has no hits.
MXO02650.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:28 Download gff for
MXO02650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10965-PA | 1..642 | 9..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:08 Download gff for
MXO02650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Corp-RA | 145..786 | 2..647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:03 Download gff for
MXO02650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Corp-RA | 145..786 | 2..647 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:03 Download gff for
MXO02650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8270328..8270866 | 109..647 | 100 | <- | Minus |
| X | 8271163..8271265 | 2..108 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:08 Download gff for
MXO02650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8164361..8164899 | 109..647 | 100 | <- | Minus |
| arm_X | 8165196..8165298 | 2..108 | 96 | | Minus |
