MXO02658.5prime Sequence
699 bp (699 high quality bases) assembled on 2007-04-10
> MXO02658.5prime
CAGTCGACATGAGCTACAACGAGAAATCGGAGGCCATCATCAAGGAGGAG
TGGCTGCAGCGCCTGGAGCAGTTTCCCTTCAAGCAGGCGGACATGAATCG
CCTGATCATGAACTACTTGGTCACAGAGGGCTTCAAGGAGGCCGCCGAGA
AGTTCCAGCACGAGGCGGATCTGGAGCCCAGCGTGGAGCTGAGCAGCCTC
GATGGGCGCATACTCATCCGCGAAGCCGTGCAGGCGGGCCGCATCGAGGA
GGCCACCCAGCTGGTGAACCAGCTGCATCCTGAGCTGCTCGGCAGCGATC
GCTATCTGTTCTTCCACCTGCAGCAGCTGCAGCTCATCGAGCTGATACGC
GCCGGCAAGGTGGAGGAGGCCCTGTCCTTTGCCCAAACCAAGCTGTCCGA
GTCCGGCGAGGAGGCCATGTTTGAGCTGGAGCGCACCCTGGCCCTGCTCG
CCTTCGAGAAGCCGCAGGAGAGCCCCTTCGCCGACCTGCTGGAGCAGTCG
TACCGCCAGAAGATCGCTAGCGAGCTCAACTCGGCCATCCTGCGCTGCGA
GCAGAGCGAGGACTCCACGCCCAAAATGATGTTCCTGCTCAAGCTGATCT
TGTGGGCCCAGTCCAAGCTGGACAGCCGCTCCATTAGCTATCCCAAGATG
AAGAACCTAGAGACGGCGCACCTGGAGCCCAAGGCAAGCTTTCTAGACC
MXO02658.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:13:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-PA | 678 | CG6617-RA | 1..675 | 9..683 | 3350 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6617-RA | 989 | CG6617-RA | 175..849 | 9..683 | 3360 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18649536..18650097 | 683..122 | 2795 | 99.8 | Minus |
| X | 23542271 | X | 18650153..18650270 | 126..9 | 590 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:08 has no hits.
MXO02658.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:32 Download gff for
MXO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-PA | 1..678 | 9..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:28 Download gff for
MXO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 170..849 | 2..683 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:24 Download gff for
MXO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6617-RA | 170..849 | 2..683 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:24 Download gff for
MXO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18649536..18650092 | 127..683 | 99 | <- | Minus |
| X | 18650153..18650275 | 2..126 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:28 Download gff for
MXO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18543569..18544125 | 127..683 | 99 | <- | Minus |
| arm_X | 18544186..18544308 | 2..126 | 96 | | Minus |
