MXO02659.5prime Sequence
662 bp (598 high quality bases) assembled on 2007-04-10
> MXO02659.5prime
CAGTCGACATGGCCCGGTTGAAGCTGAGGAAACTGGAGGAGTACCTGCAG
GGCGTTGACGGTTTCGAGCAGCCCAAGATCCTGTTGGAACAGTACCCCAC
TCCGCCGCACATAGCCGCGTGCATGGCTCATCACATGCAGTCGCAGCACG
AGGACATCGAGGGAAAGCTGGTGGGAGATTTGGGCTGCGGCTGCGGAATG
CTCAGCATTGCTTCCACTCTGCTGGGCGCCCAGCTCACGGTGGGCTTCGA
ACTGGACGGCGATGCCGTGGACACCTTTAGGGGCAATGTGGTGGAGATGG
AGCTACCCAATGTTGACTGCGTGCGGGCGGATGTGCTGCAGCTGATCGGC
AGCAAGTGGGAGAAGTCCTTTGACACGGTGCTGATGAATCCCCCATTCGG
CACGAAACACAATGCCGGCATGGACATGCGGTTTCTGGAGGTGGCCCTAC
GGTTGGCCAACAGAGCAGTTTACTCCCTACACAAGACGTCAACACGGTCG
TACATTCAGAAAAAGGCACTGGAATGGGGCGCCCGCGGCTCAGTGGTCGC
CGAACTCCGGTAAACATCGACGCCAGCTACAAGTTTCACAAGCAGAAGTC
GAAGGATATTGAAGTGGACTTCTGGCGCTTTGAAATCGGCACGGAAGCAA
GCTTTCTAGACC
MXO02659.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:13:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9666-PA | 642 | CG9666-RA | 1..639 | 9..646 | 3130 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42374-RB | 1635 | CG42374-RB | 903..1541 | 9..646 | 3155 | 99.7 | Plus |
| CG42374-RA | 1227 | CG42374-RA | 495..1133 | 9..646 | 3155 | 99.7 | Plus |
| CG9666-RD | 1635 | CG9666-RD | 903..1541 | 9..646 | 3155 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19264956..19265445 | 9..498 | 2450 | 100 | Plus |
| 3L | 28110227 | 3L | 19266593..19266744 | 496..646 | 695 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:30 has no hits.
MXO02659.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:32 Download gff for
MXO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9666-PA | 1..642 | 9..647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:07 Download gff for
MXO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42374-RA | 485..1133 | 1..646 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:49 Download gff for
MXO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9666-RD | 893..1541 | 1..646 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:49 Download gff for
MXO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19264946..19265443 | 1..496 | 99 | -> | Plus |
| 3L | 19266594..19266744 | 497..646 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:07 Download gff for
MXO02659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19258046..19258543 | 1..496 | 99 | -> | Plus |
| arm_3L | 19259694..19259844 | 497..646 | 98 | | Plus |
