MXO02661.5prime Sequence
666 bp (619 high quality bases) assembled on 2007-04-10
> MXO02661.5prime
CAGTCGACATGGAATACAAACCCGTGCCCACGGTTAAGGACGCAGCTCCC
TTCGACGCCTCCCAGGACGCCCAGGTGCTGCGGGCGGCGATGAAGGGATT
CGGCACCGACGAGCAGGAAATCATCGACGTGCTCGTCGGCAGGAGCAACC
AGCAGAGGCAGACGATCAAGGCGGTTTACGAAGCGGAGTTCGAGCGCGAC
CTGGTGGACGATCTTAAGGACGAGCTGGGAGGCAAGTTCGAGGACGTGAT
CGTGGGTCTAATGATGCCACCAGTGGAGTACCTGTGCAAGCAACTGCACG
CCGCCATGGCGGGCATCGGAACCGAGGAGGCCACGCTCGTCGAGATCCTG
TGCACCAAGACCAACGAGGAGATGGCCCAGATCGTGGCCGTCTACGAGGA
GCGCTACCAGCGCCCGCTGGCCGAGCAGATGTGCAGCGAGACCTCCGGCT
TTTTCCGCCGCCTGCTCACGCTGATCGTGACCGGAGTACGTGACGGACTG
GACACGCCCGTCGACGTCGGTCAGGCCAAGGAGCAGGCCGCCCAGCTCTA
CTCGGCCGGCGAGGCCAAGCTGGGAACGGACGAGGAGGTCTTCAACCGGA
TCATGTCGCACGCCAGCTTCCCGCAGCTGCGACTCGTCTTCGAGGAGTAC
AAGGTGCTCTCCGGGC
MXO02661.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9579-PA | 963 | AnnX-RA | 1..658 | 9..666 | 3290 | 100 | Plus |
| CG33498-PA | 366 | CG33498-RA | 1..64 | 603..666 | 295 | 98.4 | Plus |
| CG33487-PA | 369 | CG33487-RA | 1..64 | 603..666 | 295 | 98.4 | Plus |
| CG33496-PA | 369 | CG33496-RA | 1..64 | 603..666 | 295 | 98.4 | Plus |
| CG33491-PA | 369 | CG33491-RA | 1..64 | 603..666 | 295 | 98.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AnxB10-RB | 1247 | CG9579-RB | 135..792 | 9..666 | 3290 | 100 | Plus |
| AnxB10-RA | 1244 | CG9579-RA | 135..792 | 9..666 | 3290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20172371..20173016 | 666..21 | 3230 | 100 | Minus |
| X | 23542271 | X | 20187409..20187594 | 666..481 | 900 | 98.9 | Minus |
| X | 23542271 | X | 20218181..20218364 | 666..483 | 890 | 98.9 | Minus |
| X | 23542271 | X | 20225916..20226099 | 666..483 | 890 | 98.9 | Minus |
| X | 23542271 | X | 20179534..20179717 | 666..483 | 890 | 98.9 | Minus |
| X | 23542271 | X | 20195143..20195326 | 666..483 | 890 | 98.9 | Minus |
| X | 23542271 | X | 20202859..20203042 | 666..483 | 890 | 98.9 | Minus |
| X | 23542271 | X | 20210529..20210712 | 666..483 | 890 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:48:53 has no hits.
MXO02661.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:33 Download gff for
MXO02661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9579-PA | 1..658 | 9..666 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:14 Download gff for
MXO02661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AnxB10-RA | 131..792 | 1..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:57 Download gff for
MXO02661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AnxB10-RA | 131..792 | 1..666 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:57 Download gff for
MXO02661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20172371..20173016 | 21..666 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:14 Download gff for
MXO02661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20066404..20067049 | 21..666 | 100 | <- | Minus |
