MXO02666.5prime Sequence
774 bp (774 high quality bases) assembled on 2007-04-10
> MXO02666.5prime
CAGTCGACATGGCCCTGCCGCAAAAGCACTTCAAGAGGGGTTCGCCCAAA
CCGGAGATCCCCGAGGATGGAGTCCTGCGTTACTATTCGATGAGATTCTG
CCCGTACTCGCAGCGTGCCGGTTTGGTTTTGGCCGCCAAAAAGATTCCAC
ATCACACGGTTTACATTGATCTTAGCGAGAAACCAGAGTGGTACATCGAC
TACAGTCCATTGGGCAAGGTGCCGGCTATCCAGTTGCCAAATCTGCCTGG
ACAACCGGCTTTGGTGGAGTCCCTGGTCATTGCCGAGTACTTGGATGAAC
AGTATCCGGGCGAGGGCTCCCTTTTCCCCAAGGATCCATTGCAAAAGGCG
CTAGACAGGATTCTCATCGAACGCCTGTCGCCCGCTGTCAGCGCCATTTA
CCCCGTGCTGTTCACCAAGAATCCACCCGCTGATGCCATCAAGAACTTTG
AGACCGCTCTGGATGTCTTCGAGCAGGAGATCACCAAGCGCGGAACACCA
TACTTTGGAGGCAACAAGATCGGCATTGCTGACTACATGATTTGGCCCTG
GTTCGAGCGATTCCCGGCCCTCAAGTACACTCTGGATGAACCCTACGAGT
TGGACAAGACACGCTATCAGAATTTGTTGAAGTGGAGGGATCTGGTGGCT
CAGGATGAGGCTGTCAAGGCCACCGCTTTGGATGCCCGAATCCATGCGAA
GTTCATGAAGACCCGCCATGAGAACAAACCGGACTACGATGTAGCCTTCC
AGCCCTTGGCAAGCTTTCTAGACC
MXO02666.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:14:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6673-PB | 753 | CG6673-RB | 1..750 | 9..758 | 3750 | 100 | Plus |
| CG6673-PA | 756 | CG6673-RA | 1..35 | 9..43 | 175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstO2-RB | 912 | CG6673-RB | 71..820 | 9..758 | 3750 | 100 | Plus |
| GstO2-RA | 932 | CG6673-RA | 71..469 | 9..410 | 280 | 72.3 | Plus |
| GstO3-RA | 881 | CG6776-RA | 495..599 | 452..556 | 210 | 81.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8522503..8523222 | 758..39 | 3600 | 100 | Minus |
| 3L | 28110227 | 3L | 8519909..8520013 | 452..556 | 195 | 79 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:28:33 has no hits.
MXO02666.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:36 Download gff for
MXO02666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6673-PB | 1..753 | 9..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:16 Download gff for
MXO02666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstO2-RB | 71..825 | 9..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:09 Download gff for
MXO02666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstO2-RB | 71..825 | 9..763 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:09 Download gff for
MXO02666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8522498..8523221 | 40..763 | 99 | <- | Minus |
| 3L | 8523401..8523431 | 9..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:16 Download gff for
MXO02666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8515598..8516321 | 40..763 | 99 | <- | Minus |
| arm_3L | 8516501..8516531 | 9..39 | 100 | | Minus |
