MXO02670.5prime Sequence
516 bp (516 high quality bases) assembled on 2007-04-10
> MXO02670.5prime
CAGTCGACATGGTGGACGACAGCACTCGAAAAACGTTGAGCAACATTCCG
CTGCTGCAGATTCGCGCTGGTCCGCGCGAAAAGGATGTGTGGGTGCAGCG
GCTCAAGGAGGAGTACCAGGCACTAATTAAGTATGTGGAGAACAACAAAC
AGTCCGGCAGCGACTGGTTCCGTCTGGAATCCAACAAGGAGGGCACCAAG
TGGTTCGGAAAGTGTTGGTACATGCACAACCTGTTAAAGTACGAGTTCGA
CGTGGAGTTCGACATTCCAGTGACGTACCCAACCACCGCGCCCGAGATTG
CCCTGCCAGAACTTGACGGCAAGACAGCGAAGATGTACCGTGGTGGCAAG
ATCTGTCTGACGGATCACTTTAATCCACTGTGGGCACGCAATGTTCCCAA
GTTTGGGATCGCCCACGCTATGGCTCTGGGTCTTGCTCCCTGGCTGGCCG
TGGAGATTCCGGATCTCATCGAGAAGGGAATCATTACGTACAAGGAAAAG
GCAAGCTTTCTAGACC
MXO02670.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8386-PA | 495 | CG8386-RA | 1..492 | 9..500 | 2435 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8386-RA | 656 | CG8386-RA | 97..592 | 5..500 | 2450 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16007087..16007388 | 431..130 | 1495 | 99.7 | Minus |
| 2R | 25286936 | 2R | 16007445..16007571 | 131..5 | 620 | 99.2 | Minus |
| 2R | 25286936 | 2R | 16006957..16007025 | 500..432 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:27:55 has no hits.
MXO02670.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:38 Download gff for
MXO02670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8386-PA | 1..495 | 9..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:14 Download gff for
MXO02670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8386-RA | 93..601 | 1..511 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:42 Download gff for
MXO02670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8386-RA | 93..601 | 1..511 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:42 Download gff for
MXO02670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16007087..16007386 | 132..431 | 99 | <- | Minus |
| 2R | 16007445..16007575 | 1..131 | 97 | | Minus |
| 2R | 16006948..16007025 | 432..511 | 93 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:14 Download gff for
MXO02670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11894453..11894530 | 432..511 | 93 | <- | Minus |
| arm_2R | 11894592..11894891 | 132..431 | 99 | <- | Minus |
| arm_2R | 11894950..11895080 | 1..131 | 97 | | Minus |
