MXO02671.5prime Sequence
528 bp (528 high quality bases) assembled on 2007-04-10
> MXO02671.5prime
CAGTCGACATGCAGGATTTTCTGCCTTCGCTGGATGTTCTCTTTCTTGGA
CTACCAGGCCACTACTCGGTAGCGCTGGTCACCCTTCTGCTGTGCGTTTT
GGTCGCCTTCTACTTCGCCAACATCTTCAAGGACAAAGGCGAACTGGAGG
ACGAGGGCCTGGGGGCCGACGAGCCGCGCGATGAGGAGGATTCCGAGTCA
CGGACTCCGCAAGGGGAGGAAACCGACGATGACGAGGCCTACGAAGAGAA
CTCCACCGAAAGCGAAGTTGAGCTAATCGAGGAACAGCTGCCCGAGCACA
GCTACAACCACCTGATGGGCCAGCTCAAGGCCAAGAGGCTCCAGCATAAG
ATGGAGAAGACCCTGACTCCCATCCAAATCGAGGAGGAGCGCCGAATAGA
GCGCGAGCAGCTGGCGGCCATCTTTGAGCTCCTGCGCAAACAGGAGGCGG
AATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTG
CGGCTCTATCGCGCAAGCTTTCTAGACC
MXO02671.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:15:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7407-PA | 507 | CG7407-RA | 1..504 | 9..512 | 2495 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7407-RA | 1049 | CG7407-RA | 67..575 | 4..512 | 2515 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21823726..21824097 | 141..512 | 1845 | 99.7 | Plus |
| 3L | 28110227 | 3L | 21823527..21823664 | 4..141 | 675 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:33:41 has no hits.
MXO02671.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:39 Download gff for
MXO02671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7407-PA | 1..507 | 9..515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:00 Download gff for
MXO02671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7407-RA | 63..580 | 1..517 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:34 Download gff for
MXO02671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7407-RA | 63..580 | 1..517 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:34 Download gff for
MXO02671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21823523..21823663 | 1..140 | 97 | -> | Plus |
| 3L | 21823726..21824101 | 141..517 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:00 Download gff for
MXO02671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21816623..21816763 | 1..140 | 97 | -> | Plus |
| arm_3L | 21816826..21817201 | 141..517 | 98 | -> | Plus |
