MXO02674.5prime Sequence
520 bp (109 high quality bases) assembled on 2007-04-10
> MXO02674.5prime
CAATCGACATGAACAGCCTAAGGACAGCAACCATGCGATTTGCCACTCTG
GCCAGCTCCAATGCCGGATCTCTCGGCAAGCGCGATTTCACCCGCAGCCT
GTGGCACATGACAAAAAAGCCGGTGACGGACGGAGGATCCGATCATGTAA
ACGTGTTGAATCTCCACAAGCCCAGAATTAATTGCACGTGCGGCTGCAAC
GAGCACACCAAATGTGAGCGGGAACTGGAGAAGTTCCTCACCGAGGATAT
AATGGCCGAGCGCAAGGTTCAAAAGGGCAAGACAGTGCCAAGCACCCTGG
ATGGATTCGCCGAAAAACTGACCGGCGCCGATGTGGAGCTCACCTAGCAG
ACGGATAAAGAAAAGGTGGTGGTCAGCTTCACTGTGAACCATACGGGGGA
CAGCGAGGAGGAGACCGAAATCAACCCCAATGCATGACAATCCGGATCTC
GGTGAAATGAGAAGCAAACCCCAGTTCGAGGTGGACATCATAAAGGGCAA
CTCAACGCTGTCCTTTACCT
MXO02674.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:15:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6459-PA | 792 | CG6459-RA | 1..511 | 9..520 | 1970 | 95.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| P32-RA | 1154 | CG6459-RA | 107..617 | 9..520 | 2205 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17671904..17672209 | 520..214 | 1275 | 95.1 | Minus |
| 2R | 25286936 | 2R | 17672328..17672534 | 215..9 | 915 | 96.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:24:48 has no hits.
MXO02674.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:40 Download gff for
MXO02674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6459-PA | 1..511 | 9..520 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:05 Download gff for
MXO02674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| P32-RA | 100..617 | 1..520 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:24 Download gff for
MXO02674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| P32-RA | 100..617 | 1..520 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:24 Download gff for
MXO02674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17671904..17672209 | 214..520 | 95 | <- | Minus |
| 2R | 17672330..17672538 | 1..213 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:05 Download gff for
MXO02674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13559409..13559714 | 214..520 | 95 | <- | Minus |
| arm_2R | 13559835..13560043 | 1..213 | 94 | | Minus |
