MXO02675.5prime Sequence
696 bp (613 high quality bases) assembled on 2007-04-10
> MXO02675.5prime
CAGTCGACATGGAGCCGTTTACCCATAATGATGGCAATCGCGACGAACTA
ATAATTCAGCAGAAACGGGATATTGAAAAAGAGATCAGCGACACAACTCC
CTTGGTCAGCGAGCAGTTGCCACTCACCTGCTTGTATGCGGAATACAGTG
GCGACGAGATCTTCACCGCCAAGATCCAGGATCTGTCCAAAAAGTACAAG
TTCATTCGCCGCACCCGCCCCGATGGCAATTGTTTCTTCCGAGCCTTCGC
CTACTCCTACTTGGAGTACTTGATCTCAAACACCAGTGCCTACCAGGAGT
TCAAAAAACTGGCCGAGGAGTCCAAGGAGAAGCTCGTTCAGCTGGGATTT
CCTAGTTTTACATTGGAGGACTTTCACGAAACGTTCATGGAAGTCATCCA
GCGCGTTAGCCCCGACAATGCAGGAGGACACAGCACGGTCCAAGATGAGT
TGCACAAGATCTTCAATGAGCAGGGTTACTCAGACTACGTGGTGGTTTAC
CTACGTTTGATCACCTCGGGAAAACTGCAGGAGGAGGCCGATTTTTACCA
AAATTTCATCGAAGGCGACCTCACCATTGAGGCGTTCCGCCATCTGGAAG
TGGAGCCGATGTACAAGGAATCGGATCACATCCACATAATCGCTCTATGC
ACCGCCCTCGGCGCTGGAGTTCGTGTCGAGTACTTGGACCGTGGCG
MXO02675.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:15:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4968-PA | 789 | CG4968-RA | 1..688 | 9..696 | 3440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4968-RA | 986 | CG4968-RA | 122..811 | 7..696 | 3450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10307557..10307870 | 383..696 | 1570 | 100 | Plus |
| 2L | 23513712 | 2L | 10307192..10307493 | 82..383 | 1510 | 100 | Plus |
| 2L | 23513712 | 2L | 10307043..10307119 | 7..83 | 385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:34:09 has no hits.
MXO02675.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:40 Download gff for
MXO02675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4968-PA | 1..688 | 9..696 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:04 Download gff for
MXO02675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4968-RA | 115..811 | 1..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:44 Download gff for
MXO02675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4968-RA | 115..811 | 1..696 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:44 Download gff for
MXO02675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10307036..10307119 | 1..83 | 95 | -> | Plus |
| 2L | 10307194..10307493 | 84..383 | 100 | -> | Plus |
| 2L | 10307558..10307870 | 384..696 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:04 Download gff for
MXO02675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10307036..10307119 | 1..83 | 95 | -> | Plus |
| arm_2L | 10307194..10307493 | 84..383 | 100 | -> | Plus |
| arm_2L | 10307558..10307870 | 384..696 | 100 | | Plus |
