MXO02681.5prime Sequence
687 bp (687 high quality bases) assembled on 2007-04-10
> MXO02681.5prime
CAGTCGACATGCTGCGTTCGGCGATGATGTCATCGACCCTGTCCCGGGCT
CTCCAAAAGGCGACTCAGACACCGAATGCGTCGATTTCGGCGCTGCCCGC
TCTGAATTTGGCCCTGGTGCGCCAACAACAAACGCTTCCAGTTGCCGAAG
TGGCCCAAAATCTGCCCAAGAAGGGCTACTCTCCGTTCGGCACCAAACAG
TCCTCCGTTGCGGAGTGGTCACTGGCCAGACTGGACGATCTGCTCAACTG
GGGTCGCAAGGGCTCGATCTGGCCACTGACTTTCGGTTTGGCCTGCTGTG
CCGTCGAAATGATGCACATCGCTGCTCCGCGTTACGACATGGATCGATAT
GGTGTTGTGTTCCGTGCATCTCCACGTCAGGCCGATGTCATCATCGTCGC
TGGCACGCTGACCAACAAAATGGCACCGGCCCTGCGAAAGGTCTACGACC
AAATGCCCGAGCCACGTTGGGTCATCTCCATGGGCAGCTGTGCCAACGGC
GGCGGCTACTACCATTACTCGTACTCCGTCGTCCGTGGCTGCGATAGGAT
AATCCCCGTCGACATATACGTACCCGGTTGTCCGCCAACCGCCGAGGCGC
TCATGTACGGCGTTTTGCAGCTGCAGAAGAAGGTTAAGCGGATGAAGACG
CTCCAGATGTGGTATAGGAAGGCAAGCTTTCTAGACC
MXO02681.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:16:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9172-PB | 666 | CG9172-RB | 1..663 | 9..671 | 3315 | 100 | Plus |
| CG9172-PA | 666 | CG9172-RA | 1..663 | 9..671 | 3315 | 100 | Plus |
| CG2014-PA | 639 | CG2014-RA | 256..338 | 291..373 | 190 | 89.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9172-RC | 1282 | CG9172-RC | 77..741 | 7..671 | 3325 | 100 | Plus |
| CG9172-RA | 909 | CG9172-RA | 80..744 | 7..671 | 3325 | 100 | Plus |
| CG9172-RB | 897 | CG9172-RB | 68..732 | 7..671 | 3325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15986014..15986678 | 671..7 | 3325 | 100 | Minus |
| 3R | 32079331 | 3R | 29516034..29516480 | 225..671 | 1080 | 82.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:27 has no hits.
MXO02681.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:43 Download gff for
MXO02681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9172-PA | 1..666 | 9..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:32 Download gff for
MXO02681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9172-RB | 60..736 | 1..676 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:09 Download gff for
MXO02681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9172-RB | 60..736 | 1..676 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:09 Download gff for
MXO02681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15986010..15986682 | 1..676 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:32 Download gff for
MXO02681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15880043..15880715 | 1..676 | 99 | | Minus |
