MXO02684.5prime Sequence
829 bp (779 high quality bases) assembled on 2007-04-10
> MXO02684.5prime
CAGTCGACATGGAAGATATACAAAGATTTCAAAGGTCTCTAAAAGACTTT
GATTATTTCAAAGACTTTCAATGTTTTCTGAATATCAAACACAATTCTCG
AGCGCGGGCAACGCATATAAAGAAAAGGAACCCAAGATTTAATCCATTGA
CCGATCTAAATGAGCATAAATTTCGACTAAAGTACCGATACACTAAGGAA
AACCTTCGCAGAATTATTGAAATTGTACGGGATGACTTGGAAATTGAATA
TTTTGAGCCGTTAAAGAGGGAGCAAGTTCCAATAGATTTGCAGATTCTAT
CCGCTATTCGCTTGTGGGGCGGCACAGAGCACCCCAAATTAACTGCAATG
GCCCATGGCGTTAGTTTACGCACTTTGGCAAAAATAACTAGGCGCGTGGC
ATCTGTCCTATCATCGAAAGCTTCCAGGTATATCCGAATGCCGGCTACTC
TATCGGAAAAGGAGCGATCTGGTTCGGCGTTTCAAGCAATTGCCAATATG
CCGCAAGTCATTGGTGCTTTACTACAGACAACTGTGAGGTTTCAACCGGA
AAACTGTGCCCCTGATCTGGATGGAGAGGAGCTTTTGCCCGCCCTTACCA
GCCGGGAGGAGGAACTTCACATTCAGATTGTTTGCGATGCGGCTCATAAG
ATAAGGGACCTTGATATCCGACTGATCGATGAGCAGTCCATGCTCACCGA
CACCGAGATGTTCGGTCTGTCCAAAATAAAGGATCGATTCGAACAGAACG
AGTTCCGGGGTCGTATTTTGCTGGGCAACGAAATGGTGCGCTGCTCCTCC
TCCCTGTTCACACCGGTTCGATTCCCGAG
MXO02684.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12253-PA | 1137 | CG12253-RA | 1..821 | 9..829 | 4105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12253-RA | 1240 | CG12253-RA | 30..850 | 9..829 | 4105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10988284..10988785 | 328..829 | 2510 | 100 | Plus |
| 2L | 23513712 | 2L | 10987835..10988155 | 9..329 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:47:05 has no hits.
MXO02684.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:44 Download gff for
MXO02684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12253-PA | 1..821 | 9..829 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:00 Download gff for
MXO02684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12253-RA | 21..850 | 1..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:41 Download gff for
MXO02684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12253-RA | 21..850 | 1..829 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:41 Download gff for
MXO02684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10987826..10988155 | 1..329 | 98 | -> | Plus |
| 2L | 10988286..10988785 | 330..829 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:00 Download gff for
MXO02684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10987826..10988155 | 1..329 | 98 | -> | Plus |
| arm_2L | 10988286..10988785 | 330..829 | 100 | | Plus |
