MXO02685.5prime Sequence
756 bp (633 high quality bases) assembled on 2007-04-10
> MXO02685.5prime
CAGTCGACATGTTTCTCACGCGTCCCGAGTACGACAGAGGCGTGAACACC
TTCTCGCCGGAGGGCCGCCTCTTCCAAGTGGAATATGCCATTGAGGCCAT
CAAATTGGGCTCCACAGCAATTGGAATTTGCACGCCAGAAGGAGTGGTTT
TGGCGGTGGAGAAGCGCATCACTTCGCCGCTAATGGTACCCAGTACTGTG
GAGAAGATTGTGGAGGTGGACAAGCACATTGGTTGCGCCACCTCCGGCTT
GATGGCCGATGCCAGGACTCTGATCGAGAGGGCACGCGTGGAGTGCCAGA
ACCACTGGTTCGTCTACAACGAGCGCATGTCCATCGAGTCCTGCGCCCAG
GCTGTGTCCACTTTGGCCATCCAGTTCGGTGATAGTGGCGACAGCGATGG
TGCCGCCGCCATGAGTCGTCCCTTTGGTGTGGCCATTCTATTTGCCGGCA
TCGAGGCGGGACAACCCCAGTTGTGGCACATGGATCCCTCCGGCACATTC
GTGCGCCACGGAGCCAAGGCCATTGGCTCGGGCAGCGAAGGTGCTCAGCA
GAATCTGCAGGACTTATTTAGACCCGATTTGACTCTCGATGAGGCTATCG
ACATTTCGCTCAACACACTTAAACAGGTTATGGAGGAGAAACTAAACTCC
ACCAATGTGGAGGTGATGACCATGACGAAAGAAAGAGAGTTCTACATGTT
CACCAAGGAGGAGGTGGAGCAGCACATTAAGAACATTGCGGCAAGCTTTC
TAGACC
MXO02685.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10938-PA | 735 | ProsMA5-RA | 1..732 | 9..740 | 3635 | 99.8 | Plus |
| CG10938-PB | 735 | ProsMA5-RB | 1..732 | 9..740 | 3635 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosalpha5-RB | 873 | CG10938-RB | 72..804 | 8..740 | 3650 | 99.9 | Plus |
| Prosalpha5-RA | 884 | CG10938-RA | 83..815 | 8..740 | 3650 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17413100..17413700 | 140..740 | 3005 | 100 | Plus |
| 2R | 25286936 | 2R | 17412910..17413044 | 8..142 | 660 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:07:26 has no hits.
MXO02685.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:45 Download gff for
MXO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10938-PB | 1..735 | 9..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:19 Download gff for
MXO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha5-RA | 80..820 | 1..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:05 Download gff for
MXO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha5-RA | 80..820 | 1..746 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:05 Download gff for
MXO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17412902..17413043 | 1..141 | 97 | -> | Plus |
| 2R | 17413102..17413705 | 142..746 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:19 Download gff for
MXO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13300407..13300548 | 1..141 | 97 | -> | Plus |
| arm_2R | 13300607..13301210 | 142..746 | 99 | | Plus |
