MXO02687.5prime Sequence
369 bp (367 high quality bases) assembled on 2007-04-10
> MXO02687.5prime
CAGTCGACATGGAAAGGCTGACCGGAAGGAATGTGGCACTACTGGTGCTG
TGCCTGTGCGCCGGATACGCCCTGGTGTTCGCCGAGGGCGAGAAGGAGAT
ACCGGTTACCAAATTCGGACAGAACATAGCGCCGACGATGACTTTCCTTT
ACTGCTACTCCTGCGGCTATCGCAAGGCGTTCGAGGACTACGTGGGCCTG
CTGGGCGAGAAGTATCCGCAAATTCAGGTGAATGGCGGCAACTACGATCC
GCCGGGTCTAAACTATTACCTCTCCAAGATGATATTCGCCCTGAAGATCA
TAATCATTGTGTCCGTGGTCAGTGCGGTCAGTCCGTTCACCTTCCTTGGC
CTGAACACGCCCAGTTGGT
MXO02687.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3887-PA | 597 | CG3887-RA | 1..361 | 9..369 | 1805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3887-RC | 1130 | CG3887-RC | 269..629 | 9..369 | 1805 | 100 | Plus |
| CG3887-RB | 908 | CG3887-RB | 47..407 | 9..369 | 1805 | 100 | Plus |
| CG3887-RA | 960 | CG3887-RA | 99..459 | 9..369 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5011411..5011626 | 154..369 | 1080 | 100 | Plus |
| 2L | 23513712 | 2L | 5011190..5011335 | 9..154 | 730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:40 has no hits.
MXO02687.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:45 Download gff for
MXO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3887-PA | 1..361 | 9..369 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:14 Download gff for
MXO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3887-RA | 93..459 | 1..369 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:55 Download gff for
MXO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3887-RA | 93..459 | 1..369 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:55 Download gff for
MXO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5011184..5011335 | 1..154 | 97 | -> | Plus |
| 2L | 5011412..5011626 | 155..369 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:14 Download gff for
MXO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5011184..5011335 | 1..154 | 97 | -> | Plus |
| arm_2L | 5011412..5011626 | 155..369 | 100 | | Plus |
