MXO02690.5prime Sequence
759 bp (609 high quality bases) assembled on 2007-04-10
> MXO02690.5prime
CAGTCGACATGAACTTAAGCACAAGAGTTATGCTGAATAGGTTGACACAG
CAGTGTGTCTACAAGCGGATTGTGACCTTCTCCACCAAAACTGCGGAACA
TGTAATTGAAAATCAGGAGGAACAGAAGAAAGAGGCTCCGCCAACCACGC
CGACTTCACCGGTGAACCGGAAGACAATCATTCCGGCCAATTATCGGTTT
GTTTACCCAGAATTCCTGCCCGATCCGAAGGTGGAGTGGCGCAACCTCGT
GCGCGAGAAGCTGGAGCGACTGGACATGCTGGATCGCCGCAAACAGATCG
ACCTGCCCGAGTTCTACGTTGGATCTGTGCTTGCGGTGACAAGTTCGGAT
CCCCATGCCGCTGGCAAAACCAGTCGATTTGTGGGTATCTGTATCAATAG
GGATCGCTGTGGACTGCGCGCCCGTTTCATTCTTCGCAACGTGATTGATC
ACCAGGGAATGGAGGTGGTCTACGAGCTGTATGATCCTACCATCCTAAAG
ATCGAGGTGTTGCGGCTAGAGAAGCGACTGGATGACAGTCTTTTCTACCT
GCGGGACGCTCTTCCGGAGTACAGTACTTTTGATGAGAACATGGAGGCCG
AGCCGCTCGAGGAGGGTGCTCCGGTGCCGGTGAACGACATTAAGGTGGTG
CTCCGTCCGCGTCCATGGCTGGAGCGCTGGGAACGACAGAATCTGCGTGG
TGTGGCCAACATCGATGAGTATCTAAAAGACAAGCATCGCCTGTCGGCGG
CCAAGGTGC
MXO02690.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:17:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8039-PA | 921 | mRpL19-RA | 1..751 | 9..759 | 3755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL19-RA | 1036 | CG8039-RA | 79..829 | 9..759 | 3755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8674302..8674989 | 72..759 | 3440 | 100 | Plus |
| 3R | 32079331 | 3R | 8674187..8674250 | 9..72 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:00 has no hits.
MXO02690.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:46 Download gff for
MXO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8039-PA | 1..751 | 9..759 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:09 Download gff for
MXO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL19-RA | 70..829 | 1..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:31 Download gff for
MXO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL19-RA | 70..829 | 1..759 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:31 Download gff for
MXO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8674178..8674250 | 1..72 | 94 | -> | Plus |
| 3R | 8674303..8674989 | 73..759 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:09 Download gff for
MXO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4499900..4499972 | 1..72 | 94 | -> | Plus |
| arm_3R | 4500025..4500711 | 73..759 | 100 | | Plus |
