MXO02691.5prime Sequence
537 bp (537 high quality bases) assembled on 2007-04-10
> MXO02691.5prime
CAGTCGACATGATTGAAATGAACAAAACTGCAATCGGCATTGCAGCGGGA
GTAGCTGGAACTCTGTTTATTGGATACTGCATCTACTTCGACAAGAAGCG
CCGCAGCGATCCCGAGTACAAGAAGAAAGTCCGTGAGCGTCGCCGTCGCA
ACAAGAAAACCGGCACTGCCAAGTCTGGAGTTCCCAATCTGAACGACCAT
GAAGCCATCGAAAGATATTTCCTTCAAGAAATCCAGCTGGGCGAGACCCT
GATCGCCCGCGGAGATTTCGAGAGTGGCGTGGAGCACTTGGCGAATGCCA
TCGTCGTGTGTGGCCAGCCGGCTCGTCTGCTGCAGGTGCTGCAATCCTCC
CTTCCAGCTCAAGTATTCGCGATGCTGATCGTCAAGATGCAGGAGTTCGG
CAATCGAGCGGCCGAGGGCAACGACGGGCCAATCGTTTTGGGGCAGAGCT
CGGAGCAACAACTGGACGGAGCCAAAATTATAGAGTGTTCATCTGGAAAC
GCAAGTATCGACGACCTCGAAGCAAGCTTTCTAGACC
MXO02691.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7654-PA | 516 | Tom20-RA | 1..513 | 9..521 | 2565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tom20-RB | 1008 | CG7654-RB | 206..718 | 9..521 | 2565 | 100 | Plus |
| Tom20-RA | 743 | CG7654-RA | 80..592 | 9..521 | 2565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20001848..20002156 | 213..521 | 1545 | 100 | Plus |
| 3L | 28110227 | 3L | 20001167..20001298 | 9..140 | 660 | 100 | Plus |
| 3L | 28110227 | 3L | 20001361..20001436 | 139..214 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:13 has no hits.
MXO02691.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:47 Download gff for
MXO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7654-PA | 1..516 | 9..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:13 Download gff for
MXO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom20-RA | 73..592 | 1..521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:40 Download gff for
MXO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tom20-RA | 73..592 | 1..521 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:40 Download gff for
MXO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20001160..20001296 | 1..138 | 97 | -> | Plus |
| 3L | 20001361..20001436 | 139..214 | 100 | -> | Plus |
| 3L | 20001850..20002156 | 215..521 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:13 Download gff for
MXO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19994260..19994396 | 1..138 | 97 | -> | Plus |
| arm_3L | 19994461..19994536 | 139..214 | 100 | -> | Plus |
| arm_3L | 19994950..19995256 | 215..521 | 100 | | Plus |
