MXO02693.5prime Sequence
807 bp (753 high quality bases) assembled on 2007-04-10
> MXO02693.5prime
CAGTCGACATGGCGGGCAATTTTTGGCAGAGTTCGCACTCGCAGCAGTGG
ATTTTGGACAAACCCGATCTGCTCCGGGAGCGTCAGCACGATTTGTTGGC
CCTTAACGAGGATGAATACCAAAAGGTGTTTATTTTCTTCGCAAATGTGA
TCCAGGTGCTCGGCGAGCAGCTAAAGCTGAGGCAACAGGTCATCGCCACG
GCGACGGTTTACTTCAAGAGATTCTATGCGAGGAACTCCCTGAAGAACAT
CGATCCTCTGCTGCTGGCGCCCACTTGCATCTTGCTGGCCTCGAAGGTGG
AGGAGTTCGGTGTCATTTCCAATTCACGACTGATCTCGATCTGCCAGTCG
GCCATTAAGACAAAGTTCAGCTATGCGTACGCTCAGGAGTTTCCCTACCG
CACCAATCACATCCTGGAGTGCGAGTTTTACCTGCTGGAGAACCTGGATT
GCTGCTTGATTGTCTACCAGCCGTACAGACCGCTGCTGCAGCTGGTTCAG
GACATGGGCCAGGAGGACCAGTTGCTCACCCTGAGCTGGCGTATCGTAAA
CGATTCCCTGCGCACCGATGTCTGCCTGCTCTATCCTCCTTACCAGATCG
CTATAGCCTGCCTTCAAATCGCCTGCGTCATCCTGCAAAAGGACGCCACG
AAGCAGTGGTTCGCAGAATTGAATGTTGATTTAGACAAGGTCCAGGAGAT
CGTGCGCGCCATTGTAAATCTGTACGAGTTGTGGAAGGACTGGAAGGAAA
AGGACGAGATTCAGATGCTGCTGTCCAAGATTCCGAAACGAAACCACCGC
CTCAGCG
MXO02693.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7281-PA | 804 | CycC-RA | 1..800 | 9..807 | 3960 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycC-RA | 1142 | CG7281-RA | 145..948 | 5..807 | 3980 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14889470..14890061 | 596..5 | 2945 | 99.8 | Minus |
| 3R | 32079331 | 3R | 14889198..14889411 | 807..595 | 1020 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:33 has no hits.
MXO02693.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:48 Download gff for
MXO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7281-PA | 1..800 | 9..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:20 Download gff for
MXO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycC-RA | 126..936 | 1..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:08 Download gff for
MXO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycC-RA | 138..948 | 1..807 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:08 Download gff for
MXO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14889198..14889409 | 597..807 | 99 | <- | Minus |
| 3R | 14889470..14890062 | 1..596 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:20 Download gff for
MXO02693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10714920..10715131 | 597..807 | 99 | <- | Minus |
| arm_3R | 10715192..10715784 | 1..596 | 99 | | Minus |
