MXO02694.5prime Sequence
856 bp (738 high quality bases) assembled on 2007-04-10
> MXO02694.5prime
CAGTCGACATGCCCAAGGTTACGAAGGAAAAGAAGAGCCGGATTCATAAT
GATGTGCAAAAACAGGGGATCGTTTTCAACAAGGACTTTGGTCAGCACAT
CCTGAAGAATCCTCTGGTGATAACCACCATGCTGGAGAAAGCCGCTTTGA
GAGCTACCGATGTGGTGCTGGAAATCGGTCCTGGAACCGGAAACATGACC
GTTCGGATGCTGGAGCGCGCCAAGAAAGTGATCGCCTGTGAGATTGACAC
ACGATTGGCCGCCGAGTTGCAGAAGCGTGTGCAGGCAACTCCGCTGCAGC
CGAAGCTCCAGGTGCTGATTGGAGACTTCCTAAAGGCGGAGCTGCCCTTC
TTCGATCTGTGCATCGCCAACGTTCCGTATCACATCAGTTCGCCACTGAT
CTTCAAGTTGCTCCTCCACCGACCACTCTTCCGTTGCGCCGTACTTATGT
TCCAACGCGAGTTCGCAGAACGATTGGTGGCCAAACCGGGTGATAAGCTC
TACTGTCGTCTGAGTATCAACACCCAACTGCTGGCCCGGGTGGACATGCT
CATGAAGGTGGGCAAGAACAACTTTAGGCCGCCACCAAAGGTAGAAAGCA
GTGTGGTCCGGCTGGAGCCAAAAAACCCACCGCCACCGGTCAACTTCACC
GAATGGGACGGACTCACCCGTATTGCCTTCCTGCGCAAGAACAAAACGCT
GGCGGCTACCTTTAAGGTGACGTCCGTTTTGGAGATGTTGGAGAAAAACT
ACAAGCTATACCGCTCACTCAGGAATGAGCCGATTGAAGACGACTTCAAA
TGCAGGATAANGTCATAAGTATCTTGGAGGAACAGGACATGGCCGCAAAA
CGTGCG
MXO02694.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11837-PA | 921 | CG11837-RA | 1..849 | 9..856 | 4161 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11837-RA | 1103 | CG11837-RA | 108..956 | 9..856 | 4194 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29049719..29050432 | 66..779 | 3555 | 99.9 | Plus |
| 3R | 32079331 | 3R | 29050495..29050574 | 778..856 | 339 | 97.5 | Plus |
| 3R | 32079331 | 3R | 29049600..29049658 | 9..67 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:28:46 has no hits.
MXO02694.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:48 Download gff for
MXO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11837-PA | 1..849 | 9..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:26 Download gff for
MXO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11837-RA | 99..956 | 1..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:17 Download gff for
MXO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11837-RA | 99..956 | 1..856 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:17 Download gff for
MXO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29049591..29049657 | 1..66 | 94 | -> | Plus |
| 3R | 29049720..29050432 | 67..779 | 99 | -> | Plus |
| 3R | 29050497..29050574 | 780..856 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:26 Download gff for
MXO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24875313..24875379 | 1..66 | 94 | -> | Plus |
| arm_3R | 24875442..24876154 | 67..779 | 99 | -> | Plus |
| arm_3R | 24876219..24876296 | 780..856 | 97 | | Plus |
