MXO02695.5prime Sequence
726 bp (611 high quality bases) assembled on 2007-04-10
> MXO02695.5prime
CAGTCGACATGCCGCGCACCAAGATACCAAAGAACTCCAAACGCAACCGC
GAGGTGGCCAATCGCGAAGAGAAGGTGCGCCTGTACGAGCTGAAAATGGA
TTCCCGCCTTATCAGCATCGATTCGCTGGAGACCAAGTTCCTCTCCGCCG
TGGACCACCAGGTGAAGACACTGCTCGGCCAGGTGCAGAAGGAGCTGGCC
AATCTGAAGATGCCCGAAGTGCTGCGCCTCTTCGAGGAACTGGACCGCTT
CAGCGACTTCAAGGCCAGCGATCAGACGCAGCTGCTCGCCTCGATGTCCA
TGAGTGGCAGCGCCATCGAGGGCCACGCCCCCTCCGCCACTGGAAGTCGC
AATGACGAAGAGGACAGCAGCATCGGTGCCAGCGGTGGGAGCATCCTGGC
CGCCCACACAGGCTCCCTGCTGCGGTCCACGAAGGCCATGCGCACACCCG
GACCACTGCACTCGGCGAGGGCTCGTCGAGCGCGGCGCAGTCGTTCCGCC
TGCGGGGATCTCAACATATTGCACTCGGCCAAACCGCCGTCAATTTCGAG
CAGCAGCAGCAGCAGCCGCAATTCGCGCAGCAAACTGCGCACACCGATGG
CCTCGCGTGCGAAGGCCTTCAGTGCCGACCGCACTCCTTTGAAACAGAAG
CAAATGCGCTCCGGATCGCCAACTACACCGCCGATGGCATTCCTGCGCTA
TCCCAAGCCCGGCGAGGTGGCACTAT
MXO02695.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4454-PA | 948 | Borr-RA | 1..718 | 9..726 | 3590 | 100 | Plus |
| CG4454-PB | 960 | Borr-RB | 363..730 | 359..726 | 1840 | 100 | Plus |
| CG4454-PB | 960 | Borr-RB | 1..352 | 9..360 | 1760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| borr-RA | 1286 | CG4454-RA | 133..850 | 9..726 | 3590 | 100 | Plus |
| borr-RB | 1298 | CG4454-RB | 133..862 | 9..726 | 3460 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9251973..9252340 | 726..359 | 1840 | 100 | Minus |
| 2L | 23513712 | 2L | 9252635..9252986 | 360..9 | 1760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:24 has no hits.
MXO02695.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:48 Download gff for
MXO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4454-PA | 1..718 | 9..726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:22 Download gff for
MXO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| borr-RA | 125..850 | 1..726 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:54 Download gff for
MXO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| borr-RA | 125..850 | 1..726 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:54 Download gff for
MXO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9252635..9252990 | 1..360 | 98 | | Minus |
| 2L | 9251973..9252338 | 361..726 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:22 Download gff for
MXO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9252635..9252990 | 1..360 | 98 | | Minus |
| arm_2L | 9251973..9252338 | 361..726 | 100 | <- | Minus |
