Clone MXO02701 Report

Search the DGRC for MXO02701

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:27
Well:1
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptDlc90F-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02701.5prime Sequence

357 bp (357 high quality bases) assembled on 2007-04-13

> MXO02701.5prime
CAGTCGACATGGATGACTCACGCCAAGAAAGCCAGTTCATTGTGGACGAC
GTGAGCAAGACGATTAAAGAGGCCATCGAGACGACCATCGGCGGTAACGC
CTACCAGCACGACAAGGTGAACAACTGGACCGGCCAGGTGGTGGAGAACT
GCCTGACGGTGCTCACCAAGGAGCAGAAGCCCTACAAGTACATTGTGACC
GCCATGATCATGCAAAAGAACGGTGCTGGACTCCACACCGCCAGCTCCTG
CTACTGGAACAACGACACCGACGGATCGTGCACAGTACGCTGGGAGAACA
AGACCATGTACTGCATCGTTTCGGTCTTCGGACTGGCCGTCGCAAGCTTT
CTAGACC

MXO02701.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG12363-PA 336 Dlc90F-RA 1..333 9..341 1640 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dlc90F-RA 816 CG12363-RA 194..526 9..341 1650 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18299422..18299754 9..341 1650 99.7 Plus
Blast to na_te.dros performed on 2014-11-28 19:28:33 has no hits.

MXO02701.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:49 Download gff for MXO02701.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12363-PA 1..336 9..342 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:24 Download gff for MXO02701.5prime
Subject Subject Range Query Range Percent Splice Strand
Dlc90F-RA 186..526 1..341 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:57 Download gff for MXO02701.5prime
Subject Subject Range Query Range Percent Splice Strand
Dlc90F-RA 186..526 1..341 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:57 Download gff for MXO02701.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18299414..18299758 1..346 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:24 Download gff for MXO02701.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14125136..14125480 1..346 97 -> Plus