MXO02702.5prime Sequence
774 bp (768 high quality bases) assembled on 2007-04-13
> MXO02702.5prime
CAGTCGACATGCGGATGTGCTCACCTATGTGGCTGCAGATGACGCTGGGA
CTGGCCCTGCTGGGTGCTGTGTCATTGCAGCAACTGCAGTCGTTTCCCAA
GCTCTGCGATGTGCAAAACTTCGACGACTTCCTCCGGCAGACGGGCAAGG
TGTACTCGGATGAGGAGCGAGTCTATCGCGAGAGCATCTTCGCGGCCAAG
ATGTCGCTGATCACGCTGAGCAATAAGAACGCCGACAACGGCGTGTCCGG
ATTCCGGCTGGGCGTCAATACGCTGGCCGACATGACCAGAAAGGAGATAG
CCACCTTGCTGGGCTCCAAAATCTCCGAATTTGGCGAGAGATATACGAAT
GGCCATATCAACTTTGTGACTGCCAGGAATCCGGCGAGTGCCAATCTTCC
CGAGATGTTCGATTGGCGCGAGAAGGGCGGAGTGACGCCACCGGGATTCC
AGGGTGTGGGATGCGGTGCCTGCTGGTCGTTCGCCACCACAGGAGCGCTC
GAAGGACATCTATTCCGGCGGACTGGAGTGCTGGCCTCGCTGTCGCAGCA
GAATCTGGTGGACTGTGCCGATGACTACGGCAACATGGGCTGTGACGGTG
GCTTCCAGGAGTACGGTTTCGAGTACATACGCGATCACGGTGTAACGCTG
GCCAACAAATATCCGTACACACAGACGGAGATGCAGTGCCGTCAGAACGA
AACCGCCGGACGTCCACCGCGCGAGAGTCTGGTGAAAATTCGCGATTATG
CCACCATTACTCCCGGGGATGAAG
MXO02702.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:19:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6347-PA | 1059 | CG6347-RA | 1..764 | 9..772 | 3770 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6347-RA | 1312 | CG6347-RA | 109..872 | 9..772 | 3790 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13838489..13838923 | 338..772 | 2175 | 100 | Plus |
| 2R | 25286936 | 2R | 13837719..13838048 | 9..338 | 1620 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:36 has no hits.
MXO02702.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:50 Download gff for
MXO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-PA | 1..765 | 9..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:22 Download gff for
MXO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-RA | 109..873 | 9..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:56 Download gff for
MXO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-RA | 109..873 | 9..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:56 Download gff for
MXO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13837710..13838047 | 1..337 | 98 | -> | Plus |
| 2R | 13838489..13838924 | 338..774 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:22 Download gff for
MXO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9725215..9725552 | 1..337 | 98 | -> | Plus |
| arm_2R | 9725994..9726429 | 338..774 | 99 | | Plus |
