MXO02703.5prime Sequence
833 bp (724 high quality bases) assembled on 2007-04-13
> MXO02703.5prime
CAGTCGACATGCCGAAAAAGAAGACTGGGCAGCGTAAGAAGGCCGAGAAG
CAGAAGCTTCGCCTCAAGGAGATCCGCAGCAGAGAGGTGCCTCTTGCGGA
TTTGCCCTGCAATGCACCAATGGAGTGCGACAAGTGCGAGAAGAAGCAGA
AGTCGAGAGCCTTCTGCTATTTCTGCCAGAGCATTCAGAGATTACCCATT
TGCGCCCAGTGCGGGAAAATCAAGTGCATGCTAAAGACCGGCGACTGCGT
GGTCAAACATCCGGGCGTCTACACCACGGGCCTCGGAATGGTGGGCGCCA
TCTGCGACTTCTGCGAGGCTTGGGTTTGCCACGGACGCAAGTGTCTCCAA
AACCACGCCTGCACGTGTCCGCTGCAGAATGCGACCTGCCTGGAGTGCGA
ACGCGGTGTCTGGGAGCACGGTGGGCGCATCTTCAAGTGCTCCTTCTGCA
ACGGATTCCTGTGCGAGGACGATCAGTTCGAGCACCAGGCCAGCTGTCAG
GTGCTGGAGTCGGAGAACTACAAGTGTCAATCGTGCAACAAGCTGGGTCA
ATACTCCTGCCTGCGCTGCAAGACCTGTTACTGCGAGGATCACGTGCGTC
GCAAGGGCTTCAAGTACGACAAGAACAAGCCAATTCCATGCCCCAAGTGC
AACTACGATACCTCGGTGACCAAGGACCTCAGCATGTCCACGCGGTCGCA
CAAATTCGGGCGACAGCAACAAGGAGGCAACAGCGACGACGAGGAGGGAT
ACGGTGGATACTATGGAGCCGGTGGCAGTGGCTATTATGGTGGCGCCGCC
AGTGGGGGCTACTCCTACGGGGGTGATGACAAT
MXO02703.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:19:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10009-PA | 948 | Noa36-RA | 1..822 | 9..830 | 4110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Noa36-RA | 1138 | CG10009-RA | 68..889 | 9..830 | 4110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28598727..28599221 | 503..9 | 2475 | 100 | Minus |
| 3R | 32079331 | 3R | 28598308..28598640 | 830..498 | 1665 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:28:53 has no hits.
MXO02703.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:50 Download gff for
MXO02703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10009-PA | 1..825 | 9..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:31 Download gff for
MXO02703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Noa36-RA | 68..892 | 9..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:20 Download gff for
MXO02703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Noa36-RA | 68..892 | 9..833 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:20 Download gff for
MXO02703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28598305..28598637 | 501..833 | 99 | <- | Minus |
| 3R | 28598730..28599221 | 9..500 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:31 Download gff for
MXO02703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24424027..24424359 | 501..833 | 99 | <- | Minus |
| arm_3R | 24424452..24424943 | 9..500 | 100 | | Minus |
