MXO02706.5prime Sequence
570 bp (570 high quality bases) assembled on 2007-04-13
> MXO02706.5prime
CAGTCGACATGTTCAAAAAATTCGAAGAGAAGGACAGCATTTCCAGCATT
CAGCAGCTGAAGTCGTCTGTGCAGAAGGGCATACGTGCCAAGTTGCTGGA
GGCCTATCCCAAGTTGGAGAGTCACATCGACCTGATCCTGCCCAAGAAGG
ACTCGTACCGCATCGCCAAGTGCCATGACCACATCGAACTGCTGCTAAAC
GGAGCCGGCGACCAGGTGTTCTTTCGCCACCGCGATGGCCCCTGGATGCC
TACCCTGCGCCTCCTGCACAAGTTCCCCTACTTCGTGACCATGCAGCAAG
TGGACAAAGGCGCCATCCGCTTCGTCCTGAGCGGAGCGAACGTCATGTGT
CCCGGCCTCACATCGCCAGGCGCCTGTATGACGCCGGCCGACAAGGACAC
CGTGGTGGCCATCATGGCTGAGGGCAAGGAGCACGCCCTGGCCGTTGGAC
TCCTCACGTTATCCACACAGGAAATTCTGGCGAAGAACAAAGGCATCGGT
ATCGAGACGTACCACTTCCTCAACGACGGCCTGTGGAAGTCGAAGCCCGT
GAAGGCAAGCTTTCTAGACC
MXO02706.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:19:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5941-PA | 549 | CG5941-RA | 1..546 | 9..554 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5941-RB | 798 | CG5941-RB | 78..623 | 9..554 | 2730 | 100 | Plus |
| CG5941-RA | 1245 | CG5941-RA | 78..623 | 9..554 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6038262..6038565 | 172..475 | 1520 | 100 | Plus |
| X | 23542271 | X | 6038041..6038193 | 20..172 | 765 | 100 | Plus |
| X | 23542271 | X | 6038876..6038954 | 476..554 | 395 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:49 has no hits.
MXO02706.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:51 Download gff for
MXO02706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5941-PA | 1..549 | 9..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:43 Download gff for
MXO02706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5941-RA | 86..644 | 1..560 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:20 Download gff for
MXO02706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5941-RA | 70..628 | 1..560 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:20 Download gff for
MXO02706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6038041..6038193 | 20..172 | 100 | -> | Plus |
| X | 6038263..6038565 | 173..475 | 100 | -> | Plus |
| X | 6038876..6038959 | 476..560 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:43 Download gff for
MXO02706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5932074..5932226 | 20..172 | 100 | -> | Plus |
| arm_X | 5932296..5932598 | 173..475 | 100 | -> | Plus |
| arm_X | 5932909..5932992 | 476..560 | 96 | | Plus |
