MXO02709.5prime Sequence
678 bp (678 high quality bases) assembled on 2007-04-13
> MXO02709.5prime
CAGTCGACATGGCCAAGGTGCACATCACCAACGTGGTGGTGCTGGACAAC
CCGAGCAGCTTCTTCAACCCCTTTCAGTTCGAACTCACGTTCGAGTGCAT
TGAGGAGCTAAAAGAGGATCTAGAGTGGAAGATGATCTATGTAGGCTCGG
CGGAGTCCGAGGAGCACGACCAGGTGCTGGACACCATATACGTGGGACCT
GTGCCTGAGGGGCGACACATCTTTGTCTTCCAGGCGGATCCGCCAGACGT
CAGCAAGATCCCGGAACCGGATGCGGTGGGCGTTACCATTGTTCTGCTTA
CCTGCTCCTACCGCGGCCAGGAGTTCGTCCGCGTGGGCTACTATGTGAAT
AACGACTACGCTGACCCGGAGATGCGCGAGAACCCGCCAACAAAGCCTCT
TTTCGAGAAGCTGACGCGAAACATCCTGGCCAGCAAGCCGCGCGTCACCC
GATTCAAAATCAATTGGGACTACGGGCACATCAACGGGAATGGAAATGGC
GTGGAGAACGGCCATCAAGATGAGATGGCCACCGATGGACCGTCCACATC
GGAGGCGGCTTCAGCAGTTATCCATCCCGAAGATGATAATAGTTTGGCCA
TGCCAATGGAGAACGGAATCAAGGCCTTGAACGAGAACTCCAACTCACTG
GCCATGGAATGTGCAAGCTTTCTAGACC
MXO02709.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9383-PA | 657 | asf1-RA | 1..654 | 9..662 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| asf1-RB | 1129 | CG9383-RB | 285..939 | 8..662 | 3275 | 100 | Plus |
| asf1-RA | 1505 | CG9383-RA | 285..939 | 8..662 | 3275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19619178..19619832 | 8..662 | 3275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:29:01 has no hits.
MXO02709.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:52 Download gff for
MXO02709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9383-PA | 1..657 | 9..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:36 Download gff for
MXO02709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| asf1-RA | 281..947 | 1..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:24 Download gff for
MXO02709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| asf1-RA | 281..947 | 1..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:24 Download gff for
MXO02709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19619174..19619840 | 1..669 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:36 Download gff for
MXO02709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19612274..19612940 | 1..669 | 99 | | Plus |
