MXO02710.5prime Sequence
876 bp (764 high quality bases) assembled on 2007-04-13
> MXO02710.5prime
CAGTCGACATGACGCTTTCCCGCGCGAAGCACGCCAACCGCAACCACCTG
CCGCACCTGCTGGCCAAGGTGCCCGAGGAGCACCAGGAGCCGATCAAGAA
TATGTGCCTCAAGATGATGTCCCACGACGCATACGGACAGCCATACGATT
GGAGTCCCCGGGACTTTGAGATGGGCGCCCACTTGGGACGCGGCAAATTT
GGACGTGTCTACTTGGCGCGGGAGCGCCACTCGCACTATCTGGTGGCCAT
GAAGGTGATGTTCAAAGAGGAGCTGCGCAAGGGCTGCGTGCAGCGTCAGG
TTCTACGCGAGATCGAGATCCAGTCGCGACTGAAGCACCCGCACATCCTG
CGCCTGCTCACTTGGTTCCACGACGAGAGCCGCATCTATCTGGCCCTGGA
AATTGCGTCCGAGGGCGAGCTGTTCAAGCACCTGCGTGGCGCACCCAATC
ATCGATTCGATGAACCGCGGTCTGCGAAGTACACCTACCAAGTGGCGAAT
GCCCTCAACTACTGTCACCTGAACAACGTGATCCATCGGGATCTGAAGCC
GGAGAACATTCTGCTAACCAGCACGGACGACCTTAAGCTGGCCGACTTTG
GTTGGTCGGCGCACACGCCGAACAACAAGCGCAGGACTCTGTGCGGCACC
CTGGACTATCTGCCGCCGGAGATGGTGGATGGGAACTCCTACGACGACTC
GGTGGACCAGTGGTGCCTGGGCATTCTGTGCTACGAGTTCGTCGTCGGCT
GTCCGCCCTTCGAGTCGAACAGCACGGAGAGCACCTACAGCAAGATCCGG
CGCATGGAGATCTCCTACCCATCGCATTTGTCCAAGGGCTGCAAGGAATT
GATTGGCGGGCTGCTTCGCAAAGAAA
MXO02710.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6620-PA | 990 | ial-RA | 1..863 | 9..871 | 4315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aurB-RA | 1183 | CG6620-RA | 117..985 | 8..876 | 4330 | 99.9 | Plus |
| aurA-RA | 1577 | CG3068-RA | 1009..1139 | 546..676 | 180 | 76.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10857071..10857788 | 860..143 | 3590 | 100 | Minus |
| 2L | 23513712 | 2L | 10857839..10857978 | 147..8 | 685 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:31:30 has no hits.
MXO02710.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:53 Download gff for
MXO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6620-PA | 1..864 | 9..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:02 Download gff for
MXO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ial-RA | 111..981 | 1..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:39 Download gff for
MXO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aurB-RA | 111..981 | 1..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:39 Download gff for
MXO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10857068..10857788 | 143..863 | 99 | <- | Minus |
| 2L | 10857844..10857984 | 1..142 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:02 Download gff for
MXO02710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10857068..10857788 | 143..863 | 99 | <- | Minus |
| arm_2L | 10857844..10857984 | 1..142 | 98 | | Minus |
