MXO02713.5prime Sequence
522 bp (522 high quality bases) assembled on 2007-04-13
> MXO02713.5prime
CAGTCGACATGTCAGCGGTGCCCATGAAAGCCTTTCTGGCTGGTCTCTTC
TTGCTGGCCAATGCCTGGCACATCACAGCCATAAATGAGCAGCACCAGAA
GCATCACCTGCAGTGCTGGCACTGTAGCTCGGACACAATTGGGGCGGAGG
ACTTCTGCGACGTGACCTTCCAGGAGGACAACATTCCCACTGACCTGATC
AAGGAGCGGAATATAAATCTGCTAAGGAGCTGCAACGGCACCATTAACTC
CGATCACGAGAGGGCCGTTTGCCGCAAGACCGTGGAGGAAAATAATGGCA
AGCTGATCACCAAGCGATTCTGCTACTACACCAACAAATCAGATCCCGTG
GAGCTGTGCAACATCACCATTCCGGAGAAGAACGTGCGGCGGATATTCTG
CGAGGACTGCCTCACCGATCGCTGCAACGGAGCCTTAGCAGGTGCATCCA
TTTTGGAGATGCTGCTGCTCCTGCCCATCGCGGGCCTCATCCAACAGTTT
GCCATCGCAAGCTTTCTAGACC
MXO02713.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9335-PA | 501 | CG9335-RA | 1..498 | 9..506 | 2440 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
twit-RA | 1150 | CG9335-RA | 171..669 | 8..506 | 2465 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20856140..20856356 | 75..291 | 1085 | 100 | Plus |
2L | 23513712 | 2L | 20856418..20856632 | 292..506 | 1060 | 99.5 | Plus |
2L | 23513712 | 2L | 20852748..20852818 | 8..78 | 340 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:47 has no hits.
MXO02713.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:54 Download gff for
MXO02713.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9335-PA | 1..501 | 9..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:18 Download gff for
MXO02713.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
twit-RA | 167..674 | 1..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:59 Download gff for
MXO02713.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
twit-RA | 167..674 | 1..512 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:59 Download gff for
MXO02713.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20852744..20852818 | 1..78 | 93 | -> | Plus |
2L | 20856144..20856356 | 79..291 | 100 | -> | Plus |
2L | 20856418..20856637 | 292..512 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:18 Download gff for
MXO02713.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20852744..20852818 | 1..78 | 93 | -> | Plus |
arm_2L | 20856144..20856356 | 79..291 | 100 | -> | Plus |
arm_2L | 20856418..20856637 | 292..512 | 98 | | Plus |