Clone MXO02713 Report

Search the DGRC for MXO02713

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:27
Well:13
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG9335-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02713.5prime Sequence

522 bp (522 high quality bases) assembled on 2007-04-13

> MXO02713.5prime
CAGTCGACATGTCAGCGGTGCCCATGAAAGCCTTTCTGGCTGGTCTCTTC
TTGCTGGCCAATGCCTGGCACATCACAGCCATAAATGAGCAGCACCAGAA
GCATCACCTGCAGTGCTGGCACTGTAGCTCGGACACAATTGGGGCGGAGG
ACTTCTGCGACGTGACCTTCCAGGAGGACAACATTCCCACTGACCTGATC
AAGGAGCGGAATATAAATCTGCTAAGGAGCTGCAACGGCACCATTAACTC
CGATCACGAGAGGGCCGTTTGCCGCAAGACCGTGGAGGAAAATAATGGCA
AGCTGATCACCAAGCGATTCTGCTACTACACCAACAAATCAGATCCCGTG
GAGCTGTGCAACATCACCATTCCGGAGAAGAACGTGCGGCGGATATTCTG
CGAGGACTGCCTCACCGATCGCTGCAACGGAGCCTTAGCAGGTGCATCCA
TTTTGGAGATGCTGCTGCTCCTGCCCATCGCGGGCCTCATCCAACAGTTT
GCCATCGCAAGCTTTCTAGACC

MXO02713.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:20:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG9335-PA 501 CG9335-RA 1..498 9..506 2440 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:48
Subject Length Description Subject Range Query Range Score Percent Strand
twit-RA 1150 CG9335-RA 171..669 8..506 2465 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20856140..20856356 75..291 1085 100 Plus
2L 23513712 2L 20856418..20856632 292..506 1060 99.5 Plus
2L 23513712 2L 20852748..20852818 8..78 340 98.6 Plus
Blast to na_te.dros performed on 2014-11-28 22:46:47 has no hits.

MXO02713.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:54 Download gff for MXO02713.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9335-PA 1..501 9..510 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:18 Download gff for MXO02713.5prime
Subject Subject Range Query Range Percent Splice Strand
twit-RA 167..674 1..512 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:59 Download gff for MXO02713.5prime
Subject Subject Range Query Range Percent Splice Strand
twit-RA 167..674 1..512 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:59 Download gff for MXO02713.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20852744..20852818 1..78 93 -> Plus
2L 20856144..20856356 79..291 100 -> Plus
2L 20856418..20856637 292..512 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:18 Download gff for MXO02713.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20852744..20852818 1..78 93 -> Plus
arm_2L 20856144..20856356 79..291 100 -> Plus
arm_2L 20856418..20856637 292..512 98   Plus