MXO02721.5prime Sequence
844 bp (765 high quality bases) assembled on 2007-04-13
> MXO02721.5prime
CAGTCGACATGTTTGCCGAATCATTTCCAGTCGGTCCAGAGGCGAGCAAT
CATTCGAGAGTCCTTCGTAACGAATCCAGAGAAATGGCAGCCCGTTTCAT
AATCAGTGCGCTTCTGCTGGCTAGCCCAGCGGTATGGGGAAAGCCCACCT
TCGGACGAGAGCATGTCCACATCCGTATTCACCTGCCAGAGAGCGGTGGG
GATCACGGCGGCCACGGAGGCGGTGATTTTGGCGGCCACGGAGGCGGTGA
TTTTGGCGGCCATGGAGGTGGAGGCTATGAGATTCACTCCCACGATGGCG
GATACAGCGGCGGTGGAGGAGGCGGTGGTCATGTGAACACCTATGCTGTT
ATCACCGAGAACCACGGATACAGTTCCGGGGGTGGCGGAGGCGGTGGAGG
TGGCCACGGATACAGCTCCGGCGGATATAGTTCCGGTCATGATGATGCCA
AGATTGCTGCCATCGCTGCTGCTGCTGGCTCGTCCTCCGATCACGGACAT
GGCGGACATGGAGGCAGCGGCGGACACGGCGGAGGTTATGGTGGCCATGC
CATCGCCAACATTGCAGCCATCGCCGCCAGCTCAGACTCCTCTGATCATG
GTGGCAGCGGAGGATACGGCGGCTACAGCGGTGGCGGTCACAGCGGAGGA
GGTCATGACACCCAGGTGATTGTGGCTGCTGCTGCGGCTGGAGATTCACA
TGGCTCTTCCGGCGGATACGGCGGCGGATCCTCCGGTGGATACAGTGGTG
GCTCCTCCGGGGGCTACAATGGTGGATATTCTGGTGGATCCTCTTACAGC
GGAGCCTCCTCCTACAGCAGCGGCTCGTCCTACAGCTCTGGAGG
MXO02721.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:21:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9083-PA | 1029 | CG9083-RA | 1..836 | 9..844 | 4155 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9083-RB | 1165 | CG9083-RB | 1..830 | 15..844 | 4135 | 99.9 | Plus |
Tpc2-RB | 2769 | CG2857-RB | 1501..2243 | 844..102 | 3700 | 99.9 | Minus |
Tpc2-RB | 2769 | CG2857-RB | 2312..2405 | 101..8 | 470 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24898428..24899170 | 102..844 | 3700 | 99.9 | Plus |
2R | 25286936 | 2R | 24898266..24898359 | 8..101 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:35:06 has no hits.
MXO02721.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:57 Download gff for
MXO02721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9083-PA | 1..836 | 9..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:05 Download gff for
MXO02721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9083-RB | 1..830 | 15..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:08 Download gff for
MXO02721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9083-RB | 1..830 | 15..844 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:08 Download gff for
MXO02721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24898266..24898359 | 8..101 | 100 | -> | Plus |
2R | 24898428..24899170 | 102..844 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:05 Download gff for
MXO02721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20785789..20785882 | 8..101 | 100 | -> | Plus |
arm_2R | 20785951..20786693 | 102..844 | 99 | | Plus |