Clone MXO02721 Report

Search the DGRC for MXO02721

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:27
Well:21
Vector:pMK33-CTAP-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02721.5prime Sequence

844 bp (765 high quality bases) assembled on 2007-04-13

> MXO02721.5prime
CAGTCGACATGTTTGCCGAATCATTTCCAGTCGGTCCAGAGGCGAGCAAT
CATTCGAGAGTCCTTCGTAACGAATCCAGAGAAATGGCAGCCCGTTTCAT
AATCAGTGCGCTTCTGCTGGCTAGCCCAGCGGTATGGGGAAAGCCCACCT
TCGGACGAGAGCATGTCCACATCCGTATTCACCTGCCAGAGAGCGGTGGG
GATCACGGCGGCCACGGAGGCGGTGATTTTGGCGGCCACGGAGGCGGTGA
TTTTGGCGGCCATGGAGGTGGAGGCTATGAGATTCACTCCCACGATGGCG
GATACAGCGGCGGTGGAGGAGGCGGTGGTCATGTGAACACCTATGCTGTT
ATCACCGAGAACCACGGATACAGTTCCGGGGGTGGCGGAGGCGGTGGAGG
TGGCCACGGATACAGCTCCGGCGGATATAGTTCCGGTCATGATGATGCCA
AGATTGCTGCCATCGCTGCTGCTGCTGGCTCGTCCTCCGATCACGGACAT
GGCGGACATGGAGGCAGCGGCGGACACGGCGGAGGTTATGGTGGCCATGC
CATCGCCAACATTGCAGCCATCGCCGCCAGCTCAGACTCCTCTGATCATG
GTGGCAGCGGAGGATACGGCGGCTACAGCGGTGGCGGTCACAGCGGAGGA
GGTCATGACACCCAGGTGATTGTGGCTGCTGCTGCGGCTGGAGATTCACA
TGGCTCTTCCGGCGGATACGGCGGCGGATCCTCCGGTGGATACAGTGGTG
GCTCCTCCGGGGGCTACAATGGTGGATATTCTGGTGGATCCTCTTACAGC
GGAGCCTCCTCCTACAGCAGCGGCTCGTCCTACAGCTCTGGAGG

MXO02721.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:21:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG9083-PA 1029 CG9083-RA 1..836 9..844 4155 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG9083-RB 1165 CG9083-RB 1..830 15..844 4135 99.9 Plus
Tpc2-RB 2769 CG2857-RB 1501..2243 844..102 3700 99.9 Minus
Tpc2-RB 2769 CG2857-RB 2312..2405 101..8 470 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24898428..24899170 102..844 3700 99.9 Plus
2R 25286936 2R 24898266..24898359 8..101 470 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:35:06 has no hits.

MXO02721.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:57 Download gff for MXO02721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9083-PA 1..836 9..844 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:05 Download gff for MXO02721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9083-RB 1..830 15..844 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:08 Download gff for MXO02721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9083-RB 1..830 15..844 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:08 Download gff for MXO02721.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24898266..24898359 8..101 100 -> Plus
2R 24898428..24899170 102..844 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:05 Download gff for MXO02721.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20785789..20785882 8..101 100 -> Plus
arm_2R 20785951..20786693 102..844 99   Plus