MXO02722.5prime Sequence
645 bp (585 high quality bases) assembled on 2007-04-13
> MXO02722.5prime
CAATCGACATGCAGGTGGAACCAGCCGAAGTCGGCTGTGACGTCACGCAT
CGCCAGCAGGAGAAAAACAAAACCAATGGGATTTTCTCAACGGCAGTCAG
AAGTAAAAAAAACGGGCAACCGAACGGACGGATCTACACCTCCACGCCGA
AGACCTCGCATCCGAAACTTGAGCACTACGTAGGTGTTGCTAAACCCTCG
GAAAAGGGGCGAGTGGGAGTGGTGACCGCCCTCGATCCGCTGATCAAAAA
GGTGGCCCTTCTCTTTGGGACTCTTATCATTGGCTACAAAAGCGTCATCT
TAACGATGCCATACATCACGGGCGATTCCATCCAGGTGCTGAGCCACCAG
GGGCAAAGTAGGTGGAACGAGACCTTGGCGTGGGCCACCAGGCACCAGCT
GGGCTCCAGGCTGAGTCCCCTGCTGTGTGGCCTTCTAGTGGCAGCTTTCG
CGTACGGAATCGTGTACTTGGACAGCGCGGTGCCCGGCGTAAATCCCCCC
TCGCCCTTTACGCCGCGTTCCAAGAAACGTTTCCGCGAGGAGAAGACTGC
CTCGATGCACTTGGGCTACTTGTGCGCCCTGTTCTGCAGATTTCTGGTCA
CGGTCTTCATGTACTTCGACTTGTACTCGGCAAGCTTTCTAGACC
MXO02722.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:21:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8321-PA | 624 | CG8321-RA | 1..621 | 9..629 | 3005 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8321-RA | 1195 | CG8321-RA | 186..810 | 5..629 | 3050 | 99.2 | Plus |
| CG8321-RB | 930 | CG8321-RB | 1..545 | 85..629 | 2665 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12034131..12034432 | 5..306 | 1495 | 99.7 | Plus |
| 2R | 25286936 | 2R | 12035488..12035710 | 307..529 | 1070 | 98.7 | Plus |
| 2R | 25286936 | 2R | 12035775..12035875 | 529..629 | 490 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:58:12 has no hits.
MXO02722.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:57 Download gff for
MXO02722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8321-PA | 1..624 | 9..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:36 Download gff for
MXO02722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8321-RA | 183..810 | 1..629 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:34 Download gff for
MXO02722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8321-RA | 183..810 | 1..629 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:34 Download gff for
MXO02722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12034128..12034432 | 1..306 | 99 | -> | Plus |
| 2R | 12035488..12035710 | 307..529 | 98 | -> | Plus |
| 2R | 12035776..12035875 | 530..629 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:36 Download gff for
MXO02722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7921633..7921937 | 1..306 | 99 | -> | Plus |
| arm_2R | 7922993..7923215 | 307..529 | 98 | -> | Plus |
| arm_2R | 7923281..7923380 | 530..629 | 99 | | Plus |
