MXO02726.5prime Sequence
858 bp (819 high quality bases) assembled on 2007-04-13
> MXO02726.5prime
CAGTCGACATGCTGGCGGCCAAACAGGTGCTTAAAACAAAGAACCAGATG
GAGCCCCTCCAGGATAAGAAGCCCAGAGTGAAGACCAAGCCAAATGCGAA
GGGCAAGGTCAAGGAAAAGGGCACCGACAAGGAAAAGGGTAAGTTCAAGG
CCAAGGGCAACGGCAAGGGCAAGAACAAAAACAAGATCAGGGACTCCAAA
ACAAGCACCTCGCTGGCTCTGGAGCGCGGCAGCGGAGATGGACCGCATCA
GCTGGCCGAGGTGAGCCTGGTTGCGCTCCGCTTCATGGACATCTCGCTGC
GCCACTCGGATGTCCAGCTGCTTCAGTCCGCTAACGAGGGCGTCAACGAA
CGCCTGGTGGCCTTCTACTACGCCTACCTTCAGCACCGCCGTTATCGCTC
CGAGTTGGATTTGCACTTCCTGAATCCGGGCCTGGCCGCACGACTGCGCC
ACATGAATATGCGCCAGTTGTGGGCGATGGTGCGCGACCGCCGTCTCAAC
GAGAAACAGTTCATCCTGGTGCCGCTTTCCACCCATCCAAGACCCCACGG
ACACTGGTCCCTACTGGTGATTTCGCGGCCGGACAGCAAGTTTTACCACT
ACGATTCGTTGGACAACTGTCATTCGCCGTTGGCCGCCTCGGTGTCGGAA
ACTTTGCGGGCGCCCCTCGAAGCCTGGAAGTTCGCCCTGGTCACCGGTCG
CTGCCTACAGCAGGAGCGCCAAGCGGCTGGCAAGGAAGGCTCCGGTCGCG
ACCCTGCATCCGGAATTCACCTGATGTGCATGACCGACCACGTTGCGGAC
TATGTAGCCAGATGCGGATACGCCACCAGTTCGCTGCTCATCGCCGTAGA
CCAATCGC
MXO02726.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:22:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1503-PA | 924 | CG1503-RA | 1..846 | 9..854 | 4205 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1503-RB | 1405 | CG1503-RB | 218..1063 | 9..854 | 4215 | 99.9 | Plus |
| CG1503-RA | 1237 | CG1503-RA | 218..1063 | 9..854 | 4215 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21105620..21106152 | 541..9 | 2650 | 99.8 | Minus |
| X | 23542271 | X | 21105037..21105351 | 854..540 | 1575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:58:21 has no hits.
MXO02726.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:58 Download gff for
MXO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-PA | 1..851 | 9..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:43 Download gff for
MXO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-RA | 208..1066 | 1..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:38 Download gff for
MXO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-RA | 210..1068 | 1..858 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:38 Download gff for
MXO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21105032..21105349 | 542..858 | 99 | <- | Minus |
| X | 21105620..21106156 | 1..541 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:43 Download gff for
MXO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20976059..20976376 | 542..858 | 99 | <- | Minus |
| arm_X | 20976647..20977183 | 1..541 | 99 | | Minus |
