MXO02727.5prime Sequence
606 bp (606 high quality bases) assembled on 2007-04-13
> MXO02727.5prime
CAGTCGACATGACGATGCGACCTGATGACCACCGAAGGAAATGGGACAAG
AACGAGTACGAGAAGCTGGCGGCGGAGCGGCTGCTCAACCAGGTGGCACC
CAAGGAAGAAGAACCCGTACAGCGGGAGAACCTCAAGCGACGCGACTATA
AGGTGGACCTGGACAGCAAGCTGGGCAAGAGCGTTGTCATCAACAAGAAC
ACACCCACCTCGCAATCCGGTGGCTATTACTGCAACGTTTGCGACTGCGT
GGTCAAGGATTCCATCAACTTTCTGGACCACATCAATGGCAAGAAGCACC
AGCGCAATCTGGGCATGTCCATGAAGGTGGAGCGGAGCACCGTCGACCAG
GTAAAGGAGCGCTTCCAGCAGAACAAGAAGAAGATGGAGGAGAAGCAGAA
AGACTACGAGCTCGAGCGCCGCCTGCGGGAGGCCAAGGAGGAGGAGGATC
GCTACAAGGAACACCGCAAGGAGAAGCGAAAAGAGCGGAAGCGCAAGGCC
GAGGACACGGACTTCGAGTCCGGCGGCATGCCCGACGACATGGCCGCCAT
CATGGGCTTCTCCGGCTTCGGTGGATCAAAGAAGAACTCGGCAAGCTTTC
TAGACC
MXO02727.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:22:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11586-PA | 585 | CG11586-RA | 1..582 | 9..590 | 2910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11586-RB | 760 | CG11586-RB | 104..686 | 8..590 | 2915 | 100 | Plus |
| CG11586-RA | 1115 | CG11586-RA | 104..686 | 8..590 | 2915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4261726..4262206 | 590..110 | 2405 | 100 | Minus |
| 3L | 28110227 | 3L | 4262264..4262367 | 111..8 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:55 has no hits.
MXO02727.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:22:59 Download gff for
MXO02727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11586-PA | 1..585 | 9..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:28 Download gff for
MXO02727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11586-RA | 95..686 | 1..590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:20 Download gff for
MXO02727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11586-RA | 95..686 | 1..590 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:20 Download gff for
MXO02727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4262264..4262370 | 1..111 | 96 | | Minus |
| 3L | 4261726..4262204 | 112..590 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:28 Download gff for
MXO02727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4261726..4262204 | 112..590 | 100 | <- | Minus |
| arm_3L | 4262264..4262370 | 1..111 | 96 | | Minus |
