MXO02730.5prime Sequence
594 bp (594 high quality bases) assembled on 2007-04-13
> MXO02730.5prime
CAGTCGACATGCGTGTGCTGTCGTGCAAATTTCTTGGCCGAGTTGTTAAC
TCCGCGCTGCCCCAACAAATCATTTCACTGCGATCCCTGTCCAAAACCAG
TGCAGCTATGGTGAAAGTAGGAGACTCCCTGCCATCGGTGGATCTGTTCG
AGGACTCGCCAGCCAACAAAATCAACACCGGCGATCTCGTCAATGGCAAG
AAGGTGATCATCTTCGGCGTTCCCGGCGCCTTCACTCCAGGCTGCTCAAA
GACCCACTTGCCCGGCTATGTGAGCTCCGCCGATGAGCTGAAGTCCAAGC
AGGGCGTGGACGAGATTGTCTGCGTTTCGGTCAACGATCCCTTTGTGATG
TCCGCCTGGGGCAAGGAGCACGGAGCCGCGGGCAAGGTGCGCCTCCTAGC
TGATCCCGCCGGCGGTTTCACCAAGGCCCTGGATGTGACCATCGATCTGC
CACCACTTGGCGGCGTGCGCTCAAAGCGCTACTCGCTGGTGGTGGAGAAC
GGCAAGGTGACCGAGCTGAATGTCGAGCCCGATGGCACCGGACTCAGCTG
CTCGCTGGCCAACAACATTGGCAAGAAGGCAAGCTTTCTAGACC
MXO02730.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:22:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7217-PA | 573 | CG7217-RA | 1..570 | 9..578 | 2850 | 100 | Plus |
CG7217-PB | 573 | CG7217-RB | 1..570 | 9..578 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:53:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7215-RA | 1449 | CG7215-RA | 753..1322 | 9..578 | 2850 | 100 | Plus |
Prx5-RB | 733 | CG7217-RB | 37..606 | 9..578 | 2850 | 100 | Plus |
Prx5-RA | 1449 | CG7217-RA | 753..1322 | 9..578 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18165569..18165897 | 578..250 | 1645 | 100 | Minus |
3R | 32079331 | 3R | 18166026..18166160 | 251..117 | 675 | 100 | Minus |
3R | 32079331 | 3R | 18166352..18166462 | 119..9 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:53:08 has no hits.
MXO02730.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:00 Download gff for
MXO02730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7217-PB | 1..573 | 9..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:26 Download gff for
MXO02730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7215-RA | 745..1325 | 1..582 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:00 Download gff for
MXO02730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prx5-RA | 745..1325 | 1..582 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:00 Download gff for
MXO02730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18165565..18165895 | 252..582 | 99 | <- | Minus |
3R | 18166026..18166160 | 117..251 | 100 | <- | Minus |
3R | 18166355..18166469 | 1..116 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:26 Download gff for
MXO02730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13991287..13991617 | 252..582 | 99 | <- | Minus |
arm_3R | 13991748..13991882 | 117..251 | 100 | <- | Minus |
arm_3R | 13992077..13992191 | 1..116 | 96 | | Minus |