MXO02735.5prime Sequence
599 bp (-21 high quality bases) assembled on 2010-12-10
> MXO02735.5prime
CAATCCACATGAAAAACCTGAGTGAGACGGAAGCCGAACTCACCATGCAA
GAAAATGTTGAATGGAATCATTGCCCCAGATCCCGGTGGCCACTTCGGTG
AGCTGTTGCTTCGTTCTGGCTGTTCTGTATCTGGGTAGCCTCTACATCTG
GAGCGCCAAACACAACCGGGATCATCCAACCCCGGCCAATATAATATTCC
CCAGTGTGTCCATGGTGATGCTGGCAACCCCGTTCTTCATTTACTTCTTC
TCATCCCCGGAGCTGCTCAACCGGTTACCATTTCCCAAGCTGCTCGGTTT
GCTCTTGGAGGGATTGTGGCAGGCTGTTGTTATACCATACAGCCTGACGG
TGCTGCTCTTCCTGGGACCCATCTTTGTCAACATGCAAAACGAGTCCGTG
CGCTCCTACTTCAATCTGGACTACTGGAGGGGATCATTTGGCATTTTCAT
CTGGGTGCGCAACAATGTGATAGCACCGCTGAGCGAGGAGTTCGTGTTCC
CAGCCTGCATGATGCCCCTGATCCTGCAAAGCTTTTCACCCCTGGATGCG
TTTTCATAACGCCGCTTTTCTTCTTAGTAGCCCACTTGCATCACATATC
MXO02735.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-29 13:03:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sras-RA | 1271 | CG4852-RA | 88..678 | 9..597 | 2395 | 93.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-29 13:02:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5563861..5564265 | 9..412 | 1645 | 94.3 | Plus |
| 3L | 28110227 | 3L | 5564326..5564510 | 414..597 | 710 | 93.5 | Plus |
Blast to na_te.dros performed on 2015-01-29 13:02:57 has no hits.
MXO02735.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:44:27 Download gff for
MXO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sras-RA | 174..774 | 1..599 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:08:36 Download gff for
MXO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sras-RA | 80..680 | 1..599 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-29 14:12:40 Download gff for
MXO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sras-RA | 80..680 | 1..599 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-29 14:12:40 Download gff for
MXO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5563853..5564266 | 1..413 | 93 | -> | Plus |
| 3L | 5564326..5564512 | 414..599 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:08:36 Download gff for
MXO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5556953..5557366 | 1..413 | 93 | -> | Plus |
| arm_3L | 5557426..5557612 | 414..599 | 93 | | Plus |
