MXO02736.5prime Sequence
801 bp (711 high quality bases) assembled on 2007-04-13
> MXO02736.5prime
CAGTCGACATGACCACAGCAGCGCGTCCGACCTTCGATCCAGCCCGCGGA
GGATCCGGTCGCGGCGAAAAGGATCTGAGTGCACTGAGCAAGCAGTACTC
CAGTCGCGATTTGCCAGGCCACACGAAACTGAAATACAGGGAGACTGGCC
AGGGCACCAGCGATGAGAACCGCAACCGTGACTTCCGCAAGGAGCTGGAG
GAGCGCGAACGTGAGGCGCGCTCCGGAACGGGAGCCACTTCGTCGTCGTC
GGGCAAGGCACTGCCCTCCATTGTACGCAAGGCGATTGAGGCGAACAACG
CCGGCGGTGGCAGCAGTGCCGCAAAGCGTTCCAAGCCGGACGCAGGGCAG
CAGCAAGCGCAGCAGGCGGCTCAGCACCAGGCCGCCAATATGGACGCCGA
TGAGCCGCTGGACAACGATAGCTCCGATTCGGACAGCGATTCCGATGACG
ATGATGCCGCCCTGCTGGCCGAGCTGCAGAAGATCAAGCAGGAACGTCTG
CAGGAGACGGCGCGTCGCGAGTCGGAAAAGAAGCAGGAGGACGAACGCAT
ACGCATGGAGAACATCCTGTCCGGCAATCCACTGATGAACTATGAGCCCG
GCACCGCCGCCTCGGCAGCGGGACGTGCCTCTGGACTGGGCGGTGATCTA
AAGATAAAGCGCCGCTGGGACGATGATGTGGTCTTTAAGAATTGCGCCAG
ATCTGCGCCCGATAAGAAGACGCACTTCGTCAATGACGCCCTGCGCTCCG
ATTTCCACAAGAAGTTCATGGACAAGTACATTAAGGCAAGCTTTCTAGAC
C
MXO02736.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:23:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12135-PA | 780 | c12.1-RA | 1..777 | 9..785 | 3860 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| c12.1-RA | 1246 | CG12135-RA | 102..878 | 9..785 | 3870 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9318283..9318931 | 785..137 | 3230 | 99.8 | Minus |
| X | 23542271 | X | 9318991..9319122 | 140..9 | 660 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:53:31 has no hits.
MXO02736.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:01 Download gff for
MXO02736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12135-PA | 1..780 | 9..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:39 Download gff for
MXO02736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| c12.1-RA | 92..883 | 1..791 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:09 Download gff for
MXO02736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| c12.1-RA | 92..883 | 1..791 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:09 Download gff for
MXO02736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9318278..9318928 | 140..791 | 99 | <- | Minus |
| X | 9318992..9319130 | 1..139 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:39 Download gff for
MXO02736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9212311..9212961 | 140..791 | 99 | <- | Minus |
| arm_X | 9213025..9213163 | 1..139 | 97 | | Minus |
