MXO02737.5prime Sequence
822 bp (760 high quality bases) assembled on 2007-04-13
> MXO02737.5prime
CAGTCGACATGTCTGACGAGGAGGAGGATTATATGTCCGACAAATTCCTG
GTTGGTCTGCAAGATGTCCGACCGAGTTTGGTGCACAATCGCGGCAGAAA
GCGGCAGATTGAAGTCGAGTCCAAGAAAGATGAGCTGAAGAAGCGCCAAC
GGGAGACAGCAGCTTCTTCCGGGAACGTAGACAATGTTCGCCTTCAACAG
TCCCTCAACAAACCAATTTCCGCCGACAACAAAGGATTCCAGCTACTGGC
CAAGATGGGCTACAAAGCCGGTTCTGGGTTGGGCATAACTTCGGATGCTC
GTACTGAACCCGTGGGGATAACTATAAAGAGCGGTCGTGGAGGACTTGGG
CGCGAGGCAGCCGTTGCAGATTTGGCCCTCAAGCGGCAGAAGTTGCGGAG
GGCACATCTCCTAAACAAGGCCGGCATTAAAAGCGACGAGGAAGTCAGTA
CAGAGGCTTATAGGAGGCGCGCGACCCATAAAGCGGAGGAGCGAAAATTA
CAGTATGACATAAAACGGTGCCAGCAGACCTGCGAATCGTTGGATCTTAA
GTCCGCTATCACAGAACCAGATCTCGATTTCTTTTGGCCACCTAAACCAA
AAGATGAAGATGAATCACAGAGCGACGCCGACGATCCTGAAGTCGAGGTG
CCACCTAAGCAAGAACCATACAGTCCCTCGGAGCAATTAGAACTCCTCAC
TGGCTACCTGCGCACAGCCTATTGCTTCTGCTATTGGTGTGGGACCCATT
ACGATGACGCCGAAGATCTGGGCTCCAACTGTCCAGGACTCACTCGTGAC
GAACACGCAAGCTTTCTAAACC
MXO02737.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:23:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10053-PA | 801 | CG10053-RA | 1..798 | 9..806 | 3965 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10053-RB | 982 | CG10053-RB | 161..958 | 9..806 | 3975 | 99.9 | Plus |
| CG10053-RA | 856 | CG10053-RA | 35..832 | 9..806 | 3975 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7247365..7248116 | 55..806 | 3745 | 99.9 | Plus |
| 3R | 32079331 | 3R | 7247250..7247296 | 9..55 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:51 has no hits.
MXO02737.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:02 Download gff for
MXO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10053-PA | 1..801 | 9..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:20 Download gff for
MXO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10053-RA | 28..837 | 1..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:00 Download gff for
MXO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10053-RA | 28..837 | 1..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:00 Download gff for
MXO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7247243..7247296 | 1..55 | 92 | -> | Plus |
| 3R | 7247366..7248121 | 56..813 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:20 Download gff for
MXO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3072965..3073018 | 1..55 | 92 | -> | Plus |
| arm_3R | 3073088..3073843 | 56..813 | 99 | | Plus |
