MXO02740.5prime Sequence
792 bp (705 high quality bases) assembled on 2007-04-13
> MXO02740.5prime
CAGTCGACATGCCGCGCTCCAAACGTGATAAGAAAGTTTCCCTGACCAAA
ACCGACCGCAAGGGTCTGGCTTGGAAACAGCGCATTGTGGACGACATTCG
GTTCTGCGTGGGCAAATACCCAAATATATTCGTTTTCCAAGTTCAGAACA
TGAGGAATAGCTTGCTGAAGGATCTGCGACAGGAGTTGAAAAAGAATTCT
CGTTTTATCTTTGGCAAGAATCGTGTTATGCAGATTGGCTTGGGTCGCAC
GAAGAGCGAGGAAGTGGAGCCGGAATTGCACAAGCTATCCAAGCGATTAA
CTGGCCAGGTGGGACTGCTTTTCACGGACAAATCCAAGGAGGAAGTCCTG
GAGTGGGCAGAAAACTACTGGGCCGTGGAATACGCACGCAGTGGCTTTGT
GGCCACGGAAACGGTTACCCTGCCAGCAGGTCCCCTAGAGGACTTCGCCC
ACTCTATGGAACCGCATCTGCGTTCCCTGGGCCTGCCCACCAAATTGGAG
AAGGGAATCGTTACGCTGTACAGTGACTACACGGTTTGTGAGGAGGGCAA
AGTTCTAACACCCGAACAGGCGAGAATCCTCAAGCTGGTGGGCAAGCCCA
TGGCCAAATTTCGGCTGACCATGAAGTGCTCGTGGACAAAAAGCGAAGGC
TTCCAGCTGCATGTCGAGGATGATGTGAACGACGAGGAACAGGCTGATAG
CGCAATGGAAGAGGAGGCCGAGGCCGAGGCCATGGATGACAACGACGACG
ATGATGACGAAGAGGAGGATGATGAAGCAAGCTTTCTAGACC
MXO02740.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1381-PA | 771 | CG1381-RA | 1..768 | 9..776 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpLP0-like-RA | 948 | CG1381-RA | 105..872 | 9..776 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10098594..10099087 | 776..283 | 2470 | 100 | Minus |
| 2R | 25286936 | 2R | 10099146..10099395 | 284..35 | 1250 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:33:50 has no hits.
MXO02740.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:03 Download gff for
MXO02740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1381-PA | 1..771 | 9..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:05 Download gff for
MXO02740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpLP0-like-RA | 100..875 | 1..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:40 Download gff for
MXO02740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpLP0-like-RA | 100..875 | 1..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:40 Download gff for
MXO02740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10098590..10099085 | 285..780 | 99 | <- | Minus |
| 2R | 10099146..10099393 | 37..284 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:05 Download gff for
MXO02740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5986095..5986590 | 285..780 | 99 | <- | Minus |
| arm_2R | 5986651..5986898 | 37..284 | 100 | <- | Minus |
