MXO02753.5prime Sequence
892 bp (681 high quality bases) assembled on 2007-04-13
> MXO02753.5prime
CAGTCGACATGGGAGCAATCAATATGAGGATCTGTGTCGTGGCCGCATGT
CTCCTAATGGCATCGCAGGCCACCGGCTACACGATGGATGATCTGTGCCA
ACAGTGGTCGGGCTATGGATACATCGGCAATCCGAGCAACTGCCATGCCT
GGGGATACTGCAAGAACCAGGAGGTTGTGGCCTGGGGCACCTGTCCCAAC
GGCTTGGTGTTCAACGCGCAGGCCGGCAGCTGTGATTACGCTAATACCAC
GGTGTGCTCCACCAGTGCCGTTGAGACATGCTCCAACGTCAAATCTCCCA
TGTATGTGGCCAATCCGTTGAACTGCACCGAATACGCCTACTGCGATGGC
ACAGGCCAAATCTCCTATGGCGATTGCGGCACCGGCGGCGTCTATTCGGC
ATCCTCCACAAAATGTATATGGGGACCCGCCTGCCCGCAGGACACCATCT
GTCGGTTCATGTTGTCCAACATCTTTGTAGGCGATCCGAACCAGTGCGGC
AACTACATCAACTGCGTCAACGGCTATGGCACTTCCGAAAAATGTTCCAG
CACCGCCAATCCCTACTATAATAAAGCCACTGGCAACTGCCAGTCGACGA
ATCCGTGCACCGGCGAAGATTNCAACAGTGGAAACTCTGACCAGTTCACT
GTTGGGCAAACAAATGCAACTGCTTGTGACGAAGAAGCTTTTAAAGCAGC
AGATCCACTTACTGTAAATGGGGAATCTGTTGACTATAGGTACGTTTCTG
ATGGTGTCACCTGCTATGGGTACTACTACTGTGCAGCAGTAAACGCCACT
GGCTATTGGAACCAATGTCCCACCGGTACCCAATTCAATGCTGGGCAGTG
CGTTTCGCCAGCCTCCTTTGTCTGTACCCATAACCGATGTGG
MXO02753.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6933-PB | 1056 | CG6933-RB | 1..884 | 9..892 | 4326 | 99.5 | Plus |
| CG6933-PA | 1056 | CG6933-RA | 6..884 | 14..892 | 4301 | 99.5 | Plus |
| CG6933-PC | 1092 | CG6933-RC | 42..920 | 14..892 | 4301 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6933-RE | 1377 | CG6933-RE | 209..1092 | 9..892 | 4364 | 99.5 | Plus |
| CG6933-RB | 1246 | CG6933-RB | 78..961 | 9..892 | 4364 | 99.5 | Plus |
| CG6933-RD | 1413 | CG6933-RD | 250..1128 | 14..892 | 4339 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20218787..20219665 | 892..14 | 4339 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:34:08 has no hits.
MXO02753.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:09 Download gff for
MXO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6933-PB | 1..884 | 9..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:17 Download gff for
MXO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6933-RB | 69..961 | 1..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:50 Download gff for
MXO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6933-RB | 69..961 | 1..892 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:50 Download gff for
MXO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20218787..20219670 | 8..892 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:17 Download gff for
MXO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20211887..20212770 | 8..892 | 99 | | Minus |
