MXO02757.5prime Sequence
504 bp (504 high quality bases) assembled on 2007-04-13
> MXO02757.5prime
CAGTCGACATGTTTATGCCAAAGGCCCATCGTGTCGCGATCTACGAGTAC
CTCTTCAAGGAGGGCGTGATCGTGGCCAAGAAGGATTTCCATGCCCAGAA
GCACCCGGAACTGGAGTCGATCCCCAACTTGCACGTGATCAAGGCGATGC
AGTCGCTCCACTCGCGCGGACTGGTTAAGGAGCAGTTCGCCTGGCGCCAC
TACTACTGGTACCTCACCAACGAGGGAATCGAGGAGCTGCGCAGCTACCT
CCACCTGCCGCCCGAGATCGTGCCCTCGACGCTGAAGCGCCCTGCCCGCT
CGGAGACCGTCCGTCCCCGTCCCGCCGTTGGCGGCCCACGCGGACCCGGT
GACGCCTCCAAGACCGGAGAGGATCGCTCCGCCTACCGACGTGCTCCCGG
CGGCAGCGGAGTGGACAAGAAGGGCGATGTTGGACCCGGTGCCGGAGAGG
TCGAGTTCCGTGGCGGATTCGGACGCGGATCGCGCAACGCAAGCTTTCTA
GACC
MXO02757.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14206-PB | 483 | RpS10b-RB | 1..480 | 9..488 | 2400 | 100 | Plus |
| CG14206-PC | 483 | RpS10b-RC | 1..480 | 9..488 | 2400 | 100 | Plus |
| CG12275-PA | 492 | RpS10a-RA | 20..77 | 28..85 | 215 | 94.8 | Plus |
| CG12275-PA | 492 | RpS10a-RA | 169..234 | 177..242 | 155 | 89.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS10b-RD | 809 | CG14206-RD | 168..647 | 9..488 | 2400 | 100 | Plus |
| RpS10b-RC | 1469 | CG14206-RC | 97..576 | 9..488 | 2400 | 100 | Plus |
| RpS10b-RB | 743 | CG14206-RB | 102..581 | 9..488 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19598434..19598913 | 9..488 | 2400 | 100 | Plus |
| 3R | 32079331 | 3R | 27652836..27653104 | 9..277 | 640 | 82.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:08:09 has no hits.
MXO02757.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:11 Download gff for
MXO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14206-PC | 1..483 | 9..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:34 Download gff for
MXO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS10b-RB | 93..584 | 1..492 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:26 Download gff for
MXO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS10b-RB | 93..584 | 1..492 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:26 Download gff for
MXO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19598430..19598916 | 1..492 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:34 Download gff for
MXO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19492463..19492949 | 1..492 | 98 | | Plus |
