MXO02760.5prime Sequence
895 bp (777 high quality bases) assembled on 2007-04-13
> MXO02760.5prime
CAGTCGACATGCGTTTCCTGGTAGTCTTAGCCTGCCTGGTGGCCGTTTGT
GCCGCCGGCACTCTGCCCAACGAGGTGGAGCAGCGTCTGTTGGAGCTGGC
GGATCAGAATGGTGACATCGATCTGGTCGCGGAGCCCCAGGAGGGAGTTG
AAGTTGCCCCCCAGTTTATTGTGTCCTGGCAGGCGCGTCGCTTCATCCGC
AAGCTCCAGAAGCAGATGGAGTGCGGATGGCCCCAGTATGGCATTCCCGT
GCTGGCTCCTCTTCGCATCAACGAATTCGACCTAGACTACAAAAAGGGCA
TTTTCGAGACCTTGAACCATGTGTTCCGCCTGAAGATCGCCGGTCTGAAT
GACTTCAATATCCAGAAGTTCATGCTGAACGTGATCACCAGCAAGATTAC
CTTCGATTTTCTGTTCAAGAACATCGATACCACCGCCCAGAAGTACGACA
CTGATACGCTGATCGATGCCCTGCGCCAGTTGGGTCTGTCCGTGGAGTAC
GAGGGATCCGGAGAGCTGTTGTTCGATTTGGTCAACCTGCGTATTGCTGG
CACTCTGAAGTACAAGCTTCCCATGCTGTGGGGTTCCGCCAAGATCACCT
CGCTGAAGACCACCATCTCGTTGGAGTCTGTGACTTCGGACATCACTGGA
TTCATGGGCAACGGCAAGATCAACCGCGCCATCAACAGCCAGCTGGAGAA
CATCGTGGTAAAGGGAATCAATGGCAACCAGGACGCCATTTCCGAGACCA
TTGAGAACGCCATCGTGCCGCGAGTGAACAAAATGCTGAAGGGCAAGGAC
TTCTGGACCGTCGTGGACCTGATCCTGGCCAGCAGCGACGGTGAGAGCGA
GGACGATCCGATTGTCGTTGATGGCGATCCCTCCGCCGATCCCTG
MXO02760.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7953-PA | 894 | CG7953-RA | 1..887 | 9..895 | 4360 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7953-RB | 1154 | CG7953-RB | 37..924 | 8..895 | 4395 | 99.7 | Plus |
| CG7953-RA | 1092 | CG7953-RA | 37..924 | 8..895 | 4395 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13848250..13848993 | 152..895 | 3675 | 99.6 | Plus |
| 2L | 23513712 | 2L | 13847961..13848106 | 8..153 | 730 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:47:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 1518..1551 | 102..66 | 115 | 83.8 | Minus |
MXO02760.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:12 Download gff for
MXO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7953-PA | 1..887 | 9..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:03 Download gff for
MXO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7953-RA | 29..924 | 1..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:46 Download gff for
MXO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7953-RA | 29..924 | 1..895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:46 Download gff for
MXO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13847953..13848106 | 1..153 | 98 | -> | Plus |
| 2L | 13848252..13848993 | 154..895 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:03 Download gff for
MXO02760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13847953..13848106 | 1..153 | 98 | -> | Plus |
| arm_2L | 13848252..13848993 | 154..895 | 99 | | Plus |
